 |
Job Description | P0AC53 | Confidence | 54.78% | Date | Thu Jan 5 11:17:11 GMT 2012 |
Rank | 79 | Aligned Residues | 69 |
% Identity | 17% | Template | c3enkB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:udp-glucose 4-epimerase; |
PDBTitle: 1.9a crystal structure of udp-glucose 4-epimerase from2 burkholderia pseudomallei
|
Resolution | 1.90 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | V | I | F | G | A | K | G | D | L | A | R | R | K | L | L | P | S | L | Y | Q | L | E | K | A | G | Q | L | N | P | D | T | R | I | I | G | V | G | R | A | D | W | D | K | A | A | Y | T | K | V | V | R | E | A | L | E | T | F | M | K | E | T | I | D | E | G | L | W | D | T | L | S | A | R | L | D | F | C | N |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |
|
|
|   |
|
|   |   |   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
| . |   |   |
|
|   |   |
|
|   | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
Template Sequence |   |
T | I | L | V | T | G | G | A | G | Y | I | G | . |
S | H | T | A | V | E | L | L | A | . |
. |
. |
. |
. |
. |
. |
. |
H | G | Y | D | V | V | I | A | D | N | L | V | N | S | K | R | E | A | I | A | R | I | E | K | I | T | G | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | P | A | F | H | E |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |
|
|
| S | S | S |
| T |  |  |  |  |  |  |  |  |  |  | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 60 |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | V | N | D | T | A | A | F | S | R | L | G | A |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | D | V | S | D | E | R | A | L | A | R | I | F | D |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|