Job Description P0AC53 Confidence 97.77% Date Thu Jan 5 11:17:11 GMT 2012 Rank 9 Aligned Residues 200 % Identity 20% Template c3btuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k] Resolution 2.85 Å

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		8	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		Q	A	C	D	L	V	I	F	G	A	K	.	.	G	D	L	A	R	R	K	L	L	P	S	L	Y	Q	L	E	K	A	G	Q	L	N	P	D	T	R	I	I	G	V	G	R	A	D	W	D	K	A	A	Y	T	K	V	V	R	E	A	L	E	T	F	M	K	E	T	I	D	E	G	L	W	D	T	L	S	A	R
Query Conservation													.	.
Alig confidence													.	.																.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	I	R	V	G	F	V	G	L	N	A	A	K	G	W	A	I	K	T	H	Y	P	A	I	L	Q	L	.	.	.	.	.	.	S	S	Q	F	Q	I	T	A	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	K	I	E	T	S	I	A	T	I	Q	R
Template Known Secondary structure										S			S	S	S	S	S	G	G	G	T								T	.	.	.	.	.	.	T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																														.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.																								.	.	.	.	.	.	60	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		L	D	F	C	N	L	D	V	N	D	T	A	A	F	S	R	L	G	A	M	L	D	Q	K	N	R	I	T	I	N	Y	F	A	M	P	P	S	T	F	G	A	I	C	K	G	L	G	E	A	K	L	N	A	K	P	A	R	.	V	V	M	E	K	P	L	G	T	S	L	A	T	S	Q	E	I	N	D	Q	V	G
Query Conservation																																																											.
Alig confidence			.	.	.	.	.																								.																												.
Template Conservation			.	.	.	.	.																								.
Template Sequence		L	.	.	.	.	.	K	L	S	N	A	T	A	F	P	T	L	E	S	F	A	S	S	S	T	I	D	M	I	.	V	I	A	I	Q	V	A	S	H	Y	E	V	V	M	P	L	L	E	F	S	K	N	N	P	N	L	K	Y	L	F	V	E	W	A	L	A	C	S	L	D	Q	A	E	S	I	Y	K	A	A	A
Template Known Secondary structure		T	.	.	.	.	.	T		T	T					S	S								S	S		S			.				S		G	G	G												G	G	G		T	T								S	S			S	S
Template Predicted Secondary structure			.	.	.	.	.																								.
Template SS confidence
		67						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		165	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.											230	.
Predicted Secondary structure				.	.	.																																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.																																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	.	.	.	F	E	E	C	Q	V	Y	R	I	D	H	Y	L	G	K	E	T	V	L	N	L	L	A	L	R	F	A	N	S	L	F	V	N	N	W	D	N	R	T	I	D	H	V	E	I	T	V	A	E	E	V	G	I	E	G	R	W	G	Y	F	D	K	A	.	.	.	.	.	.	.	.	.	.	G	Q
Query Conservation				.	.	.																																																																.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.											.	.	.	.	.																				.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		E	R	G	V	Q	T	I	I	S	L	Q	G	R	K	S	.	.	.	.	.	P	Y	I	L	R	A	K	E	L	I	S	Q	G	Y	I	G	D	I	N	.	.	.	.	.	.	.	.	.	S	I	E	I	A	G	N	G	G	W	Y	G	Y	E	R	P	V	K	S	P	K	Y	I	Y	E	I	G	N	G	V	D	L
Template Known Secondary structure				T								G	G	G	G		.	.	.	.	.												T	T	T	T		S			.	.	.	.	.	.	.	.	.									S	S		S	S				T	T	S		G	G	G	G	S	T	T	S	S		S	T
Template Predicted Secondary structure																	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	D	M	I	Q	N	H	L	L	Q	I	L	C	M	I	A	M	S	P	P	S	D	L	S	A
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		V	T	T	T	F	G	.	H	T	I	D	I	L	Q	Y	M	T	S	S	Y	F	S	R	I	N	A
Template Known Secondary structure		T	T	T				.											T
Template Predicted Secondary structure								.
Template SS confidence
		207	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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