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Job DescriptionP0AC53
Confidence96.85%DateThu Jan 5 11:17:11 GMT 2012
Rank24Aligned Residues316
% Identity13%Templatec2glxD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:1,5-anhydro-d-fructose reductase; PDBTitle: crystal structure analysis of bacterial 1,5-af reductase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  LVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNL
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Template Sequence  WGLIGA. STIAREWVIGAIR. . . . . . . . ATGGEVVSMMS. . . . . . . . . . . . . . . . . . . . . . . TSAERGAAYATE. . . . . .
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   4..... 10.........20.. .......30... ......40.....
 
   92.......100.........110.........120.........130.........140.........150.........160.........170.
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Query Sequence  DVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFEECQ
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Template Sequence  . NGIGKSVTSVEELVGDPDVDAV. YVSTTNELHREQTLAAIRAGKH. . . . . VLCEKPLAMTLEDAREMVVAARE. . AGVV
Template Known Secondary structure  .TT
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GGGTT
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   46...50.........60....... ..70.........80......... 90.........100.........110.. ....
 
   172.......180.........190.........200.........210.........220......... 230.........240.......
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Query Sequence  VYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGYFDKA. . . . GQMRDMIQNHLLQILCMI
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Template Sequence  LGTNHHLRNAAAHRAMRDAIAEGRIGR. . . . . . . PIAARVFHAVYLPPHLQGWRLERPEAGGGVILDI. TVHDADTLRFV
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GGGSTTTTSS.......
B

GGG
SGGGS
GGGT
ST.
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   117..120.........130.........140... ......150.........160.........170....... ..180........
 
   248.250.........260.........270.........280.........290.........300.........310.........320.......
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Query Sequence  AMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWR
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Template Sequence  LNDDPAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AVAISH. . . . . . . . . . SAGMG. . . . . KEGVEDGVMGVLRFQS. .
Template Known Secondary structure  TT

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   189190..... ....200. ..... ...210.........220..
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  WAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLS
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Template Sequence  . . GVIAQFHDAFTTKFAETGFEVHGTEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SLIGRNVMTQKPVGTVTLRNA
Template Known Secondary structure  ..S
SB
TT


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   223......230.........240........ .250.........260.........
 
   408.410.........420.... .....430.........440.........450.........460.
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Query Sequence  YSETFNQTHLADAYERL. . . LLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDND
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Template Sequence  EGESQLPLDPANLYETALAAFHSAIEGHGQPSATGEDGVWSLATGLAVVKAAATGQA
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SSBSS
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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