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Job DescriptionP0AC53
Confidence96.72%DateThu Jan 5 11:17:11 GMT 2012
Rank27Aligned Residues347
% Identity16%Templatec1ofgF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:glucose-fructose oxidoreductase; PDBTitle: glucose-fructose oxidoreductase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2...... .10.........20.........30.........40.........50.........60.........70........
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Query Sequence  AVTQTAQ. . . ACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTKVVREALETFMKETIDEGL
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Template Sequence  YAIRPMPEDRRFGYAIVG. LGKYALNQILPGF. . . . . . . AGCQHSRIEAL. . . . . . . . . . . . . . . . . . . . . . . VSGNAEK
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STT.......TT
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   21........30........ .40.........50. ........60.. .......
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  WDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQE
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Template Sequence  AKIVAAEYGVDPRKIYDYSNFDKI. . . AKDPKIDAV. YIILPNSLHAEFAIRAFKAGKH. . . . . VMCEKPMATSVADCQR
Template Known Secondary structure  T

GGG
SSSGGGG...GG
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GGGTT
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   70.........80.........90... ......100.. .......110.........120.... .....130.........140
 
   159160.........170.........180.........190.........200.........210.........220..... ....230..
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Query Sequence  INDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGY. . . . . . FDKAGQM
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Template Sequence  MIDAAKAANKKLMIGYRCHYD. . PMNRAAVKLIRENQL. . . . . . . GKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSL
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GGGS
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   141........150.........160. ........170...... ...180.........190.........200.........210.
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
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Query Sequence  RDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSN
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Template Sequence  MDI. GIYGLNGTRYLLGEEPIE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRAYTY. . . . . . . . . . . . . SDPNDERFVE
Template Known Secondary structure  T.TS
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TT
GGGSS
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   212.. .....220.........230.. ...... .240........
 
   313......320.........330.........340.........350.........360.........370.........380.........390..
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Query Sequence  TETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
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Template Sequence  VEDRIIWQMRFRS. . . . GALSHGASSYSTTTTS. RFSVQG. . . . . . . . . . . . . . . . . . . . . . . . . . . DKAVLLMDPATGY
Template Known Secondary structure  S
STT....S
SSS

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   249250.........260. ........270....... ..280... ......290......
 
   393......400.........410.........420..... ....430.........440.........450.........460.........
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Query Sequence  LDHKHNLQITKLDLSYSETFNQTHLADAYERLL. . . LETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAG
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Template Sequence  YQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYV
Template Known Secondary structure  S


TT


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SSBSS


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   297..300.........310.........320.........330.........340.........350.........360.........370......
 
   470..
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Query Sequence  TWG
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Template Sequence  RQG
Template Known Secondary structure 
TT
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   377..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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