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Job DescriptionP0AC53
Confidence96.72%DateThu Jan 5 11:17:11 GMT 2012
Rank28Aligned Residues347
% Identity16%Templatec1h6dL_
PDB info PDB header:protein translocationChain: L: PDB Molecule:precursor form of glucose-fructose PDBTitle: oxidized precursor form of glucose-fructose oxidoreductase2 from zymomonas mobilis complexed with glycerol
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2...... .10.........20.........30.........40.........50.........60.........70........
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Query Sequence  AVTQTAQ. . . ACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTKVVREALETFMKETIDEGL
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Template Sequence  YAIRPMPEDRRFGYAIVG. LGKYALNQILPGF. . . . . . . AGCQHSRIEAL. . . . . . . . . . . . . . . . . . . . . . . VSGNAEK
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STT.......TT
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   73......80.........90 .........100... ......110.... .....120.
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  WDTLSARLDFCNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQE
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Template Sequence  AKIVAAEYGVDPRKIYDYSNFDKI. . . AKDPKIDAV. YIILPNSLHAEFAIRAFKAGKH. . . . . VMCEKPMATSVADCQR
Template Known Secondary structure  TT

GGG
SSGGGGG...GG
TT

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S
GGGTT
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SS
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   122.......130.........140..... ....150.... .....160.........170...... ...180.........190..
 
   159160.........170.........180.........190.........200.........210.........220..... ....230..
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Query Sequence  INDQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVGIEGRWGY. . . . . . FDKAGQM
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Template Sequence  MIDAAKAANKKLMIGYRCHYD. . PMNRAAVKLIRENQL. . . . . . . GKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSL
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GGGG
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TTSGGG
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   193......200.........210... ......220........ .230.........240.........250.........260...
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
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Query Sequence  RDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSN
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Template Sequence  MDI. GIYGLNGTRYLLGEEPIE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRAYTY. . . . . . . . . . . . . SDPNDERFVE
Template Known Secondary structure  T.TS
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TT
GGGSS
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   264.. ...270.........280.... .....290 .........300
 
   313......320.........330.........340.........350.........360.........370.........380.........390..
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Query Sequence  TETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
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Template Sequence  VEDRIIWQMRFRS. . . . GALSHGASSYSTTTTS. RFSVQG. . . . . . . . . . . . . . . . . . . . . . . . . . . DKAVLLMDPATGY
Template Known Secondary structure  S
STT....S
SSS

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SSSS
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   301........310... ......320......... 330..... ....340........
 
   393......400.........410.........420..... ....430.........440.........450.........460.........
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Query Sequence  LDHKHNLQITKLDLSYSETFNQTHLADAYERLL. . . LETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAG
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Template Sequence  YQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGYV
Template Known Secondary structure  S


TT


SS

SS

TT


SSBSS


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   349350.........360.........370.........380.........390.........400.........410.........420........
 
   470..
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Query Sequence  TWG
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Template Sequence  RQG
Template Known Secondary structure 
TT
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   429430.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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