Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC53
Confidence97.23%DateThu Jan 5 11:17:11 GMT 2012
Rank19Aligned Residues321
% Identity18%Templatec1evjC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:glucose-fructose oxidoreductase; PDBTitle: crystal structure of glucose-fructose oxidoreductase (gfor)2 delta1-22 s64d
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  ACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTRIIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDF
Query Conservation      









 


 


  
   
 
     


 

   
 
 

  
   
               
     
Alig confidence 







.














.......









.......................















Template Conservation   


 


. 
  
       
  .......     



 .......................
     
        
Template Sequence  RFGYAIVG. LGKYALNQILPGFAG. . . . . . . CQHSRIEALV. . . . . . . . . . . . . . . . . . . . . . . DGNAEKAKIVAAEYGV
Template Known Secondary structure 

.
STGGG.......
SS.......................
S
T
Template Predicted Secondary structure 

.

.......



.......................




Template SS confidence 















































































   31....... .40.........50... ......60... ......70.........
 
   8990.........100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  CNLDVNDTAAFSRLGAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEINDQVGEYFE
Query Conservation     
         
   
       




 

  
  
   
    
     








 

 

  

  
   
 
Alig confidence 













...








.


















.....



























.
Template Conservation           
   
...
     
 
. 
 

   
      

 
.....

 

 


 
    
   
       
.
Template Sequence  DPRKIYDYSNFDKI. . . AKDPKIDAV. YIILPNSLHAEFAIRAFKA. . . . . GKHVMCEKPMATSVADCQRMIDAAKAAN.
Template Known Secondary structure 
GGG
SSSGGGG...GG
TT

.
S
TTT.....T

SSS
SST.
Template Predicted Secondary structure 






...





.




.....











.
Template SS confidence 















































































   80.........90... ......100.. .......110.........120. ........130.........140.........
 
   169170.........180.........190.........200.........210... ......220.........230.........240..
Predicted Secondary structure 




......










Query SS confidence 












































. . . . . .




























Query Sequence  ECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITV. . . . . . AEEVGIEGRWGYFDKAGQMRDMIQNHLLQ
Query Conservation 
 











 




 




  






  
  



 ...... 
  




  


  












Alig confidence  .


























.......









......






















.




Template Conservation  .    
    
  
        
  
 
.......
 
                            

 
 
 
. 
 

Template Sequence  . KKLMIGYRCHYDPMNRAAVKLIRENQL. . . . . . . GKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIG. IYGLN
Template Known Secondary structure  .



GGGG
TTSS.......
S






S
TTS
GGGSSSST.
Template Predicted Secondary structure  .











.......






















.
Template SS confidence 















































































   150.........160.........170...... ...180.........190.........200.........210..... ....220
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  ILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDRSNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVD
Query Conservation 







 
    
  

 

 


 




   

    




 

   
  
 

  
 

   
 





 

 
Alig confidence 











.............................





.............



















Template Conservation      
 
  
  .............................
 
   .............            
     
 
Template Sequence  GTRYLLGEEPIE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VRAYTY. . . . . . . . . . . . . SDPNDERFVEVEDRIIWQMR
Template Known Secondary structure  TS
..........................................

TT
GGGSSS
S
Template Predicted Secondary structure 



..........................................











Template SS confidence 















































































   221........230.. ...... .240.........250........
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  IDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQIT
Query Conservation 


 

 



 




 
    


 
 

  
  

         
 


 


 
 
 
    
 

          
Alig confidence 


....















.

























..............................
Template Conservation     ....
               .   
 
  
 
               ..............................
Template Sequence  FRS. . . . GALSHGASSYSTTTTS. RFSVQGDKAVLLMDPATGYYQNLISV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT....S
SSS

.
SS
SSSS
SS


..............................
Template Predicted Secondary structure 

....







.













..............................
Template SS confidence 















































































   259260. ........270....... ..280.........290.........300...
 
   403......410.........420..... ....430.........440.........450.........460........
Predicted Secondary structure 











...


















Query SS confidence 






















. . .










































Query Sequence  KLDLSYSETFNQTHLADAYERLL. . . LETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQA
Query Conservation   
               


 

... 
 
 

 


 
 



 

 





  
         
  
Alig confidence  ............










...










































Template Conservation  ............             
  

            
     
  
   
   
  
 
    
Template Sequence  . . . . . . . . . . . . QTANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGY
Template Known Secondary structure  ............



TT


SSBSS


S

Template Predicted Secondary structure  ............



















Template SS confidence 




































































   304.....310.........320.........330.........340.........350.........360
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions