Job Description P23893 Confidence 99.94% Date Thu Jan 5 11:40:26 GMT 2012 Rank 97 Aligned Residues 344 % Identity 14% Template d2csta_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		48	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure					.																			.	.																	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence					.																			.	.																	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		D	G	K	.	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	.	.	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	.	.	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	.	.	.	.	.	.	.	.	.	P	T	M	D	M	V	R	M	V	N
Query Conservation					.																			.	.																	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence					.																			.	.																	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	D	S	R	K	V	N	L	G	V	G	A	Y	R	T	D	E	G	Q	P	W	V	L	P	V	V	R	K	V	E	Q	L	I	A	G	D	G	S	L	N	H	E	Y	L	P	I	L	G	L	P	E	F	R	A	N	A	S	R	I	A	L	G	D	D	S	P	A	I	A	Q	K	R	V	G	S	V	Q	G	L
Template Known Secondary structure					T	T						S	S					T	T	S																			T	T								T	T																T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	.	.	.	.	.	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	T	G	A	L	R	I	G	A	E	F	L	R	R	W	Y	N	G	N	N	N	T	A	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	S	V	F	M	D	A	G	F	K	D	I	R	T	Y	R	Y	W	D	A	A	K	R	G	L	.	.	.	.	.	.	.	.	.	.	.	.	D	L	Q	G	L	L
Template Known Secondary structure																		S	S	S	S	S		T	T	S						S	S			T									T	T												T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.													.	170	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.
Query Sequence		A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	.	.	.	.	.	.	.	.	A	G	A	Q	D	Y	Y	G	V	V	P	D	L
Query Conservation																																																													.	.	.	.	.	.	.	.
Alig confidence																			.																																										.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		D	D	M	E	K	A	P	E	F	S	I	F	I	L	H	A	C	.	A	H	N	P	T	G	T	D	P	T	P	D	E	W	K	Q	I	A	A	V	M	K	R	R	C	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	S	L	D	K	D	A	W	A	V	R	Y	F	V	S	E	G	F	E	L	F	C	A
Template Known Secondary structure						T	S		T	T							S	S	.	S		T	T	T																				T								S		T	T	T	T	T	S						T									T	T
Template Predicted Secondary structure																			.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		261	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.					280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.									.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure										.												.	.	.	.																																			.	.	.	.	.	.	.	.
Query SS confidence										.												.	.	.	.																																			.	.	.	.	.	.	.	.
Query Sequence		T	C	L	G	K	I	I	G	.	G	G	M	P	V	G	A	F	G	G	R	.	.	.	.	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	.	.	.	.	.	.	.	.	E	V	A	Q	P	G	V	H	E	T	L	D	E	L
Query Conservation										.												.	.	.	.																																			.	.	.	.	.	.	.	.
Alig confidence										.												.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L	S	V	V	G	K	D	E	D	N	V	Q	R	V	L	S	Q	M	E	K	I	V	R	T	T	W	S	N	P	P	S	Q	G	A	R	I	V	A	T	T	L	T	S	P	Q	L	F	A	E	W	K	D	N	V	K	T	M	A	D	R	V	L	L	M
Template Known Secondary structure					T	T	T	S			G	G	G										S	S																	T	T	T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	E	A	G	F	M	S	V	A	.
Query Conservation																																																																																	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.						.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		R	S	E	L	R	S	R	L	E	S	L	G	T	P	G	T	W	N	H	I	T	D	Q	I	G	M	F	S	F	T	G	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	Q	V	E	Y	M	I	K	E	K	H	I	Y	L	M	A	S	G	.	.	.	.	R	I	N	M	C	G
Template Known Secondary structure													T		S	S			T							S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T						T	T		.	.	.	.				G	G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.																			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.					.	.	.	.	390	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	T	K	N	L	D	Y	V	A	K	S	I	H	E	A	V	T	K	I
Template Known Secondary structure				T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions