Job Description P23893 Confidence 99.85% Date Thu Jan 5 11:40:26 GMT 2012 Rank 190 Aligned Residues 319 % Identity 13% Template d2ch1a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.4

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H
Query Conservation																																							.	.
Alig confidence																						.																	.	.																								.	.
Template Conservation																						.																																										.	.
Template Sequence		S	K	R	V	L	T	A	M	T	N	T	V	L	S	N	F	H	A	E	L	.	F	R	T	M	D	E	V	K	D	G	L	R	Y	I	F	Q	T	E	N	R	A	T	M	C	V	S	G	S	A	H	A	G	M	E	A	M	L	S	N	L	L	.	.	E	E	G	D	R	V	L	I	A	V	N	G	I	W	A	E
Template Known Secondary structure									T	T	S					T	T					.																T				S						S	S															.	.		T	T								S	S
Template Predicted Secondary structure																						.																																										.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
			146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R
Query Conservation		.
Alig confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																						.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																						.	.	.	.
Template Sequence		R	A	V	E	M	S	E	R	Y	G	A	D	V	R	T	I	E	G	P	P	D	R	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	E	T	L	A	R	A	I	E	.	.	L	H	Q	P	K	C	L	F	L	T	H	G	D	S	S	S	G	L	L	Q	P	.	.	.	.	L	E	G	V	G
Template Known Secondary structure										T	T										T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.					S						S			T	T	T	T					.	.	.	.		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.																						.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130															.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		Q	I	C	H	Q	H	D	C	L	L	I	V	D	A	V	A	S	L	C	G	V	P	F	Y	M	.	.	.	D	K	W	E	I	D	A	V	Y	T	G	A	Q	V	L	G	A	P	P	G	I	T	P	I	S	I	S	P	K	A	L	D	V	I	R	N	R	R	T	K	S	K	V	F	Y	W	D	L	L	L	L	G
Template Known Secondary structure							T	T								T	T	T	B	T	T	B				T	.	.	.	T	T	T	T															S	S																T		S	S			S		G	G	G
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
											291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	W	G	C	Y	D	E	P	K	R	Y	H	H	T	V	A	S	N	L	I	F	A	L	R	E	A	L	A	Q	I	A	E	E	G	L	E	N	Q	I	K	R	R	I	E	C	A	Q	I	L	Y	E	G	L	G	K	M	G	L	D	I	F	V	K	D	P	R	H	R	L	P	T	V	T	G	I	M	I	P	K
Template Known Secondary structure				T	T		S	S	S																																																		T			B	S	S		S	G	G	G	B		T	T								T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.					.	.	.	400	.	.	.	.				.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																														.								.	.	.	.									.	.	.
Query SS confidence																														.								.	.	.	.									.	.	.
Query Sequence		A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	.	G	V	Y	L	A	P	S	.	.	.	.	A	F	E	A	G	F	M	S	.	.	.	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K	L
Query Conservation																														.								.	.	.	.									.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.												.								.	.	.	.									.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	W	K	V	S	Q	Y	A	M	N	N	F	S	L	E	V	Q	G	G	L	G	P	T	F	G	K	A	W	R	V	G	I	M	G	E	C	S	T	V	Q	K	I	Q	F	Y	L	Y	G	F	K	E	S	L	K	A	T
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.														B			B				G	G	G	T	T	T								G	G	G		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.															.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions