Job Description P23893 Confidence 99.86% Date Thu Jan 5 11:40:26 GMT 2012 Rank 184 Aligned Residues 330 % Identity 9% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	.	.	.	.	.	.	.	.	.	.	.	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	T	M	D	M	.	.	.	V	R	M	V	N	S	G
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence															.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		E	R	A	Y	N	F	N	A	G	P	A	A	L	.	.	.	.	.	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A
Template Known Secondary structure									S	S	S				.	.	.	.	.											T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	T			S	S							S	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	.	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y
Query Conservation																															.
Alig confidence													.	.																	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation													.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		S	T	Q	F	A	M	I	P	M	N	F	.	.	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	P	K	L	Q	E	I	Q	L	.	.
Template Known Secondary structure													.	.			T	T									S														S									G	G	G	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				G	G	G				.	.
Template Predicted Secondary structure													.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.															130	.	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																										.	.	.	.										.
Template Conservation																							.	.	.	.	.	.	.	.	.																										.	.	.	.										.
Template Sequence		Q	D	N	A	A	Y	L	H	L	T	S	N	E	T	I	E	G	A	Q	F	K	.	.	.	.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	F	D	L	.	.	.	.	N	Q	F	G	L	V	Y	A	G	.	A	Q	K	N	L	G	P	S	G	V	T
Template Known Secondary structure			T	T								S			T	T	T	T				S	.	.	.	.	.	.	.	.	.	S					T	T	S							T	T	T	T	T	S	S				G	.	.	.	.	G	G		S						.	T	T	T	T	T			S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																										.	.	.	.										.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.										.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	.	.	.	.	.	.	.	.	.	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	G	F
Template Known Secondary structure							G	G	G	S	S	S			T	T	S		G	G	G								T	T	T		S	S																				T	T																						T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.					.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	.	.	.	.	E	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R
Query Conservation																																																							.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																																											.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	.	.	.	.	.	.	.	.	.	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R	L	A	S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.		S	S		G	G	G	B		S	S							S															T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.										.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		422	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	R	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions