Job Description P23893 Confidence 99.78% Date Thu Jan 5 11:40:26 GMT 2012 Rank 214 Aligned Residues 329 % Identity 12% Template d2bkwa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.57

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.														.																					.
Query SS confidence																																.	.	.	.	.	.	.														.																					.
Query Sequence		M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	T	E	M	.	.	.	.	.	.	.	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	.	L	A	R	G	F	T	G	R
Query Conservation																																.	.	.	.	.	.	.														.																					.
Alig confidence																																.	.	.	.	.	.	.														.																					.
Template Conservation
Template Sequence		T	L	L	I	P	G	P	I	I	L	S	G	A	V	Q	K	A	L	D	V	P	S	L	G	H	T	S	P	E	F	V	S	I	F	Q	R	V	L	K	N	T	R	A	V	F	K	S	A	A	A	S	K	S	Q	P	F	V	L	A	G	S	G	T	L	G	W	D	I	F	A	S	N	F	I	L	S	K	A	P	N
Template Known Secondary structure					S	S	S	S										T	T	S						T	T	S																		T	T			G	G	G	T								S		T	T											S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		K	N	V	L	V	V	S	T	G	T	F	S	D	R	F	A	D	C	L	R	S	Y	G	A	Q	V	D	V	V	R	P	L	K	I	G	E	S	V	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	L	I	T	E	K	L	S	Q	N	S	Y	G	A	.	.	V	T	V	T	H	V	D	T	S	T	A	V
Template Known Secondary structure									S	S													T	T									S	S	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.												S			S		.	.					S			T	T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.													.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																																								.	.	.	.
Query SS confidence																					.	.																																																								.	.	.	.
Query Sequence		V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	.	.	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	.	.	.	.
Query Conservation																					.	.																																																								.	.	.	.
Alig confidence					.	.	.	.													.	.																			.	.															.																					.	.	.	.
Template Conservation					.	.	.	.																																	.	.															.
Template Sequence		L	S	D	.	.	.	.	L	K	A	I	S	Q	A	I	K	Q	T	S	P	E	T	F	F	V	V	D	A	V	C	S	I	G	C	E	E	F	E	F	.	.	D	E	W	G	V	D	F	A	L	T	A	S	Q	A	.	I	G	A	P	A	G	L	S	I	S	L	C	S	S	R	F	X	D	Y	A	L	N	D	S
Template Known Secondary structure					.	.	.	.													T	T	S							T	T	T	T	T	T	S				T	.	.	T	T	T	T		S									.					S																T
Template Predicted Secondary structure					.	.	.	.																																	.	.															.
Template SS confidence
		153	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
																								287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	G	H	V	H	G	Y	F	S	S	L	R	R	W	T	P	I	X	E	N	Y	E	A	G	K	G	A	Y	F	A	T	P	P	V	Q	L	I	N	S	L	D	V	A	L	K	E	I	L	E	E	G	L	H	K	R	W	D	L	H	R	E	X	S	D	W	F	K	D	S	L	V	N	G	L	Q	L	T	S	V
Template Known Secondary structure							S		S	T	T														T	T					S	S																																										T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.						.	.	.	400	.	.	.	.				.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.									.	.	.
Query SS confidence																																																						.	.	.	.	.									.	.	.
Query Sequence		P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	.	.	.	.	.	A	F	E	A	G	F	M	S	.	.	.	V	A	H	S	M	E	D	I	N	N	T	I
Query Conservation																																																						.	.	.	.	.									.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.									.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	Y	P	S	N	X	S	A	H	G	L	T	A	V	Y	V	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	D	V	I	A	F	L	K	S	H	G	V	V	I	A	G	G	I	H	K	D	I	G	P	K	Y	I	R	I	G	H	X	G	V	T	A	C	N	K	N	L	P	Y	X	K
Template Known Secondary structure		S		S	S	S	T	T	B		S	S							S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T				B					T	T	T	G	G	G								G	G	G	T	S	S	T	T		T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.																.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		417	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	R	R	V	F	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	C	F	D	L	I	K	L	A	L
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions