Job Description P23893 Confidence 99.92% Date Thu Jan 5 11:40:26 GMT 2012 Rank 124 Aligned Residues 343 % Identity 15% Template d1yaaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.
Predicted Secondary structure																									.	.													.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.													.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		D	V	D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	.	.	P	A	I	R	N	A	V	I	E	A	A	E	.	.	R	G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	.	.	.	.	.	.	.	.	.	P	T	M	D	M	V	R	M	V
Query Conservation																									.	.													.	.																								.	.	.	.	.	.	.	.	.
Alig confidence								.																	.	.													.	.																								.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		D	Q	R	A	T	K	.	V	D	L	G	I	G	A	Y	R	D	D	N	G	K	P	W	V	L	P	S	V	K	A	A	E	K	L	I	H	N	D	S	S	Y	N	H	E	Y	L	G	I	T	G	L	P	S	L	T	S	N	A	A	K	I	I	F	G	T	Q	S	D	A	L	Q	E	D	R	V	I	S	V	Q	S
Template Known Secondary structure					S	S		.				S	S				B		T	T	S		B															T		T	T								T	T																T	T						T	T
Template Predicted Secondary structure								.
Template SS confidence
		27	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E
Query Conservation
Alig confidence																																.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	G	T	G	A	L	H	I	S	A	K	F	F	S	K	F	F	P	D	K	L	V	Y	L	S	K	P	T	W	.	A	N	H	M	A	I	F	E	N	Q	G	L	K	T	A	T	Y	P	Y	W	A	N	E	T	K	S	L	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	G	F	L	N	A	I	Q
Template Known Secondary structure																				T	T								S			.	T	T							T	T	T											T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.													.	.	.	.	.	.	.	170	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.									.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.															.	.	.
Query Sequence		Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	.	.	.	.	.	.	.	.	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.															.	.	.
Alig confidence				.																																																					.	.	.	.	.	.	.	.															.	.	.
Template Conservation				.
Template Sequence		K	A	.	P	E	G	S	I	F	V	L	H	S	C	A	H	N	P	T	G	L	D	P	T	S	E	Q	W	V	Q	I	V	D	A	I	A	S	K	N	H	I	A	L	F	D	T	A	Y	Q	G	F	A	T	G	D	L	D	K	D	A	Y	A	V	R	L	G	V	E	K	L	S	T	V	S	P	V	F	V	C	Q
Template Known Secondary structure			S	.		T	T								S	S		T	T	T																			T	T								S		T	T	T	S	S	S						T										T	T	T	T
Template Predicted Secondary structure				.
Template SS confidence
		179	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		262	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.									.	.	.	320	.	.	.	.
Predicted Secondary structure									.																					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence									.																					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		C	L	G	K	I	I	G	.	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	.	.	.	.	.	.	.	.	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	.	.	.	.	.	.	.	.	Q	P	G	V	H	E	T	L
Query Conservation									.																					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence									.																					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	A	K	N	A	G	M	Y	G	E	R	V	G	C	F	H	L	A	L	T	K	Q	A	Q	N	K	T	I	K	P	A	V	T	S	Q	L	A	K	I	I	R	S	E	V	S	N	P	P	A	Y	G	A	K	I	V	A	K	L	L	E	T	P	E	L	T	E	Q	W	H	K	D	M	V	T	M	S	S	R	I
Template Known Secondary structure				T	T	T	S			G	G	G											S		T	T																		T	T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	E	A	G	F	M	S
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		T	K	M	R	H	A	L	R	D	H	L	V	K	L	G	T	P	G	N	W	D	H	I	V	N	Q	C	G	M	F	S	F	T	G	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	M	V	K	R	L	E	E	T	H	A	V	Y	L	V	A	S	G	.	.	.	.	R	A	S
Template Known Secondary structure																T		S	S			T							S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	S	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.																			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.					.	.	.
		405	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		V	A	.	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		I	A	G	L	N	Q	G	N	V	E	Y	V	A	K	A	I	D	E	V	V	R	F
Template Known Secondary structure		G	G	G			T	T	T
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions