Job Description P23893 Confidence 99.98% Date Thu Jan 5 11:40:26 GMT 2012 Rank 47 Aligned Residues 344 % Identity 14% Template d1wsta1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.95

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.														.	.	.																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.														.	.	.																						.	.	.	.	.	.	.
Query Sequence		K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	.	.	.	.	.	.	.	.	A	I	R	N	A	V	I	E	A	A	E	R	G	.	.	.	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	.	.	.	.	.	.	.	P	T	M	D	M	V	R	M
Query Conservation																						.	.	.	.	.	.	.	.														.	.	.																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.														.	.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	L	L	K	L	V	E	T	S	D	V	I	S	L	A	G	G	L	P	A	P	E	T	F	P	V	E	T	I	K	K	I	A	V	E	V	L	E	E	H	A	D	K	A	L	Q	Y	G	T	T	K	G	F	T	P	L	R	L	A	L	A	R	W	M	E	K	R	Y	D	I	P	M	S	K	V	E	I	M	T
Template Known Secondary structure									T	S	S	S											G	G	G	S																S						S				S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F
Query Conservation
Alig confidence																		.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	G	S	Q	Q	A	L	D	L	I	G	R	V	F	L	.	.	N	P	G	D	P	I	V	V	E	A	P	T	Y	L	A	A	I	Q	A	F	K	Y	Y	D	P	E	F	I	S	I	P	L	D	D	K	G	M	R	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	E	K	L	E	E	L
Template Known Secondary structure			S	S														.	.		T	T								S											T	T											T	T						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.														.	.	170	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.
Predicted Secondary structure																																																						.																	.	.	.	.
Query SS confidence																																																						.																	.	.	.	.
Query Sequence		E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	.	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	.	.	.	.	L	T	C	L	G	K	I
Query Conservation																																																						.																	.	.	.	.
Alig confidence																																																						.																	.	.	.	.
Template Conservation
Template Sequence		R	K	Q	G	K	R	V	K	I	V	Y	T	V	S	T	F	Q	N	P	A	G	V	T	M	S	V	D	R	R	K	K	L	L	E	L	A	N	E	Y	D	F	L	I	V	E	D	G	P	Y	S	E	L	R	Y	S	G	E	P	T	P	P	I	K	H	F	D	D	Y	G	R	V	I	Y	L	G	T	F	S	K	I
Template Known Secondary structure				T	T											S	S		T	T	T																			T	T								T	T	T	T		B		S	S						G	G	G	G		S	S	S								S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	.	.	.	G
Query Conservation																																																																														.	.	.
Alig confidence																								.	.	.																																																				.	.	.
Template Conservation																								.	.	.
Template Sequence		L	A	P	G	F	R	I	G	W	V	A	A	H	P	H	L	I	R	K	M	E	I	.	.	.	A	K	Q	S	I	D	L	C	T	N	T	F	G	Q	A	I	A	W	K	Y	V	E	N	G	Y	L	D	E	H	I	P	K	I	I	E	F	Y	K	P	R	R	D	A	M	L	E	A	L	E	E	Y	M	P	E	G
Template Known Secondary structure		T		G	G	G																		.	.	.							S	S															T	T																														T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.									.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.											.
Query SS confidence																																																							.	.	.	.	.	.	.	.											.
Query Sequence		I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	.	.	.	.	.	.	.	.	A	F	E	A	G	F	M	S	V	A	.	H	S	M	E	D	I	N	N
Query Conservation																																																							.	.	.	.	.	.	.	.											.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.											.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	W	T	K	P	E	G	G	M	F	V	R	V	T	L	P	E	G	I	D	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	M	E	R	A	V	A	K	G	V	A	Y	V	P	G	E	A	F	F	V	H	R	D	K	K	N	T	M	R	L	N	F	T	Y	V	P	E	E	T	I	R	E
Template Known Secondary structure								S	B	S	S								T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T							T	T						G	G	G	G	S	T	T					S							S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.															.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	D	A	A	R	R	V	F	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	R	R	L	A	E	T	I	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions