Job Description P23893 Confidence 99.91% Date Thu Jan 5 11:40:26 GMT 2012 Rank 138 Aligned Residues 339 % Identity 14% Template d1t3ia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.80

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																	.	.
Query SS confidence																																												.	.	.	.	.	.	.																	.	.
Query Sequence		D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	T	.	.	.	.	.	.	.	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	T	.	.	M	D	M	V	R	M	V	N	S	G	T	E	A
Query Conservation																																												.	.	.	.	.	.	.																	.	.
Alig confidence													.	.	.	.																												.	.	.	.	.	.	.																	.	.
Template Conservation													.	.	.	.
Template Sequence		N	G	H	P	L	V	Y	L	D	N	A	.	.	.	.	A	T	S	Q	K	P	R	A	V	L	E	K	L	M	H	Y	Y	E	N	D	N	A	N	V	G	A	H	Q	L	S	V	R	A	T	D	A	Y	E	A	V	R	N	K	V	A	K	F	I	N	A	R	S	P	R	E	I	V	Y	T	R	N	A	T	E	A
Template Known Secondary structure		T	T							B	T	T	.	.	.	.	T																			T							S																					T	T		S		G	G	G					S	S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		119	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		T	M	S	A	I	R	L	A	R	G	.	.	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q
Query Conservation												.	.
Alig confidence												.	.																																												.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		I	N	L	V	A	Y	S	W	G	M	N	N	L	K	A	G	D	E	I	I	T	T	V	M	E	H	H	S	N	L	V	P	W	Q	M	V	A	A	K	T	G	A	V	L	K	F	V	Q	L	D	E	Q	E	S	F	.	.	.	.	.	.	.	.	.	.	.	D	L	E	H	F	K	T	L	L	S	.	.	.	E
Template Known Secondary structure									T							T	T							T	T			G	G	G	T																			B		T	T	S	S	B	.	.	.	.	.	.	.	.	.	.	.											.	.	.	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.												.	.	160	.	.	.	.	.	.	.				.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F
Query Conservation
Alig confidence																					.	.	.	.																															.	.																				.
Template Conservation																					.	.	.	.																															.	.																				.
Template Sequence		K	T	K	L	V	T	V	V	H	I	S	N	T	L	G	C	V	N	P	.	.	.	.	A	E	E	I	A	Q	L	A	H	Q	A	G	A	K	V	L	V	D	A	C	Q	S	A	P	H	Y	P	L	D	V	.	.	Q	L	I	D	C	D	W	L	V	A	S	G	H	K	M	C	A	P	T	.	G	I	G	F	L
Template Known Secondary structure		T								S	B		T	T	T		B	B			.	.	.	.											T	T								T	T	T	T	T	T	S					.	.				T		S						G	G	G	T	T	S		T	.	T
Template Predicted Secondary structure																					.	.	.	.																															.	.																				.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.
		277	.	.	280	.	.	.	.	.	.	.	.	.																		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	R	R	D	V	M	D	A	L	A	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	K	E	E	I	L	E	A	M	P	P	F	F	G	G	G	E	M	I	A	E	V	F	F	D	H	F	T	T	G	E	L	P	H	K	F	E	A	G	T	P	A	I	A	E	A	I	A	L	G	A	A	V	D	Y	L	T	D	L	G	M	E	N	I	H	N	Y	E	V	E	L	T	H	Y	L	W	Q	G	L
Template Known Secondary structure											S				S		S	T	T	S						S	S							T	T	G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.															.	.	.
Predicted Secondary structure											.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	A	G	I	P	L	V	V	.	.	.	.	.	.	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	E
Query Conservation											.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	I	P	Q	L	R	L	Y	G	P	N	P	K	H	G	D	R	A	A	L	A	S	F	N	V	A	G	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	V	A	T	M	V	D	Q	D	G	I	A	I	R	S	G	H	H	C	T	Q	P	L	H	R	L	F	D	A	S	G	S	A
Template Known Secondary structure			T		T	T					S			G	G	G	S		B		S							T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T				B		S		T	T								T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.																.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	S	L	Y	F	Y	N	T	K	E	E	I	D	L	F	L	Q	S	L	Q	A	T	I	R	F	F
Template Known Secondary structure							T	T																				T
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions