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Job DescriptionP23893
Confidence99.75%DateThu Jan 5 11:40:26 GMT 2012
Rank218Aligned Residues324
% Identity17%Templated1rv3a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PAIRNAVIEAAERGLSFGAPT. . . . . . . . . . . EMEVKMAQLVTELVPTMDMVRMVN. . . . SGTEATMSAIRLARGFTGRD
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Template Sequence  RAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALV. . EPHG
Template Known Secondary structure  TSGGGT



TTSSS

TT

TTT


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   5960.........70.........80.........90.........100.........110.........120.........130.. ....
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  KIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCV
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Template Sequence  RIMGLDLP. DGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYI. . . DYDRLEENARLFHPKL. IIAGTSCYSRNLD.
Template Known Secondary structure 
GG.GT

GGG

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   137..140.... .....150.........160.........170.........180. ........190....... ..200.........210
 
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Query Sequence  PPLPEFLPGLRALCDEFGALLIIDEVMTGF. RVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDA. . . . . . L
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Template Sequence  . . . . . . YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRG. CRAGMIFYRRGVRSEILYNLES
Template Known Secondary structure  ......TT

TTTTSS

GGGT
SSSGGG

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   211........220.........230.........240.........250.........260. ........270.........280...
 
   287..290.........300.........310........ .320.........330.........340.........350.........360...
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Query Sequence  APTGPVYQAGTLSGNPIAMAAGFACLNEVAQP. . . GVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAE
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Template Sequence  LINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELG. . . . . . . . . . . . . . . . . YKIVTGG
Template Known Secondary structure  TTTT

S

TSTT.................
GGGS
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   291........300.........310.........320.........330.........340...... ...350...
 
   364.....370....... ..380.........390... ......400... ......410.........420....
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Query Sequence  SVTCYQDVMACDVE. RFKRFFHMMLDEGVYL. . . . . . . . . APSAFEAGFM. . . . . . SVAHSMEDINNTIDAARRVFA
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Template Sequence  SDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE
Template Known Secondary structure 
SSSGGGGT

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   354.....360.........370.........380.........390.........400.........410.........420.........430
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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