Job Description P23893 Confidence 99.97% Date Thu Jan 5 11:40:26 GMT 2012 Rank 56 Aligned Residues 335 % Identity 13% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.																			.
Query SS confidence																																									.	.	.	.	.	.	.	.																			.
Query Sequence		D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	.	.	.	.	.	.	.	.	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A
Query Conservation																																									.	.	.	.	.	.	.	.																			.
Alig confidence									.	.	.	.	.	.																											.	.	.	.	.	.	.	.																			.
Template Conservation									.	.	.	.	.	.
Template Sequence		E	G	V	I	Y	L	D	.	.	.	.	.	.	G	N	S	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	R	D	G	E	V	V	V	T	D	T	T	S	I	N
Template Known Secondary structure		T	T						.	.	.	.	.	.	T	T	T	S				B	T	T											T						G	G	G					T	S	G	G	G											T	T	T	T			T	T	S					S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		119	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		T	M	S	A	I	R	L	A	R	.	.	.	.	.	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	S	P	E	E	L	P	Q	A	I	D	.
Template Known Secondary structure																	S	T	T								T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S							S	S	G	G	G						S	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	.	G	G	G	M	P
Query Conservation																																																																												.
Alig confidence		.	.																					.	.	.	.																															.	.																	.
Template Conservation		.	.																					.	.	.	.																															.	.
Template Sequence		.	.	Q	D	T	A	V	V	M	L	T	H	V	N	Y	K	T	G	Y	M	H	D	.	.	.	.	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	V	D	L	.	.	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S
Template Known Secondary structure		.	.	T	T								S	B		T	T	T		B	B			.	.	.	.												T								T	T	T	T	T	T	S					.	.				T		S						S	S	S	T	T				T	T
Template Predicted Secondary structure		.	.																					.	.	.	.																															.	.
Template SS confidence
				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																								.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	F	V	W	V	S	P	Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D
Template Known Secondary structure									T	T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	E	A	G	F	M	S	V	A	H	.	.
Query Conservation																																																																																.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	I	E	L	V	E	Q	R	C	A	A	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	E	P	R	I	M	R	F	G	F	T	P	L	Y
Template Known Secondary structure												T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.					S		S	S	G	G	G	B		S							T	T										T	T	T							T	T	T								T	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.														330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
			408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	T	F	T	E	V	W	D	A	V	Q	I	L	G	E	I	L	D	R	K
Template Known Secondary structure																					T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions