Job Description P23893 Confidence 99.93% Date Thu Jan 5 11:40:26 GMT 2012 Rank 115 Aligned Residues 322 % Identity 11% Template d1js3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.25

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																												.	.	.	.													.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence																												.	.	.	.													.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	.	.	.	.	Q	L	V	T	E	L	V	P	T	M	D	M	.	.	.	.	.	.	.	.	.	.	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	.	.	.	.
Query Conservation																												.	.	.	.													.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence																												.	.	.	.													.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		L	A	D	M	L	C	G	A	I	G	C	I	G	F	S	W	A	A	S	P	A	C	T	E	L	E	T	V	M	M	D	W	L	G	K	M	L	Q	L	P	E	A	F	L	A	G	E	A	G	E	G	G	G	V	I	Q	G	S	A	S	E	A	T	L	V	A	L	L	A	A	R	T	K	V	V	R	R	L	Q	A
Template Known Secondary structure															S	S	G	G	G																			T	T			G	G	G			T	T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
														133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	.	.	.	Y	P	Q	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	P	G	L	T	Q	G	A	V	L	E	K	L	V	A	Y	A	S	D	Q	A	H	S	S	V	E	R	A	G	L	I	G	G	V	K	L	K	A	I	P	S	D	G	K	F	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	S	A	L	Q	E	A	L	E	R	D	K	A	A	G	L	I
Template Known Secondary structure			S	T	T																T	T													T										T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.															.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	.	.	.	.	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V
Query Conservation																																																.	.	.	.
Alig confidence																				.	.	.	.																									.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		P	F	F	V	V	A	T	L	G	T	T	S	C	C	S	F	D	N	.	.	.	.	L	L	E	V	G	P	I	C	H	E	E	D	I	W	L	H	V	D	A	A	Y	A	G	S	A	F	I	C	P	E	F	R	H	L	L	N	G	V	E	F	A	D	S	F	N	F	N	P	H	K	W	L	L	V	N	F	D	C
Template Known Secondary structure									B	S		T	T	T			B			.	.	.	.											T	T								T	T	G	G	G	G	G	G	S	T	T	T	G	G	G	G	T	T	G	G	G		S										S	S			S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		274	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		G	A	F	G	G	R	R	D	V	M	D	A	L	.	.	.	.	.	.	.	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		S	A	M	W	V	K	R	R	T	D	L	T	G	A	F	K	S	G	L	I	T	D	Y	R	H	W	Q	L	P	L	G	R	R	F	R	S	L	K	M	W	F	V	F	R	M	Y	G	V	K	G	L	Q	A	Y	I	R	K	H	V	Q	L	S	H	E	F	E	A	F	V	L	Q	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S							G	G	G				S				G	G	G	S	S	S		S					T																																					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.							.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.								.
Query SS confidence																																																				.	.	.	.	.	.								.
Query Sequence		V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	.	.	.	.	.	.	A	F	E	A	G	F	M	.	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A
Query Conservation																																																				.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.	.																																												.	.	.	.	.	.								.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	P	R	F	E	V	C	A	E	V	T	L	G	L	V	C	F	R	L	K	G	S	D	G	L	N	E	A	L	L	E	R	I	N	S	A	R	K	I	H	L	V	P	C	R	L	R	G	Q	F	V	L	R	F	A	I	C	S	R	K	V	E	S	G	H	V	R	L	A	W	E	H	I
Template Known Secondary structure		.	.	.	.	.	.	.		T	T					S				S	S							S	S																T	S		B							T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	V	F	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	L	A	A	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		468	.	470	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions