Return to main results Retrieve Phyre Job Id

Job DescriptionP23893
Confidence99.66%DateThu Jan 5 11:40:26 GMT 2012
Rank230Aligned Residues330
% Identity15%Templated1ejia_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80......... 90.........100.........110... ......120.........130
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Query Sequence  HNHPAIRNAVIEAAERGLSFGAPT. . . . . . . . . . . EMEVKMAQLVTELVPTMDMVRMVN. . . . SGTEATMSAIRLARGFT
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Template Sequence  FASRAVLEALGSSLNNKYSEGYPGQRYYGGTEFIDELEXLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYTALV. . E
Template Known Secondary structure 


TSGGGG



S
SSS
SSS

TT

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   56...60.........70.........80.........90.........100.........110.........120.........130.. .
 
   131........140.........150.........160.........170.........180.........190.........200.........210
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Query Sequence  GRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNM
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Template Sequence  PHGRIXGLDLP. DGGHLTHGFXTDKKKISATSIFFESXPYKVYPETGYI. . . NYDQLEENASLFHPKL. IIAGTSCYSRN
Template Known Secondary structure  TT

GG.GT

GGG

B
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SS
B
TTT
SB...


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S
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   134.....140.... .....150.........160.........170.........180. ........190....... ..200........
 
   211........220.........230.........240... ......250.........260.........270.........280
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Query Sequence  NCVPPLPEFLPGLRALCDEFGALLIIDEVMTGF. RVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRR. . . . . . . . .
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Template Sequence  LD. . . . . . . YARLRKIADDNGAYLXADXAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGXIFYRKGVRSVDPKTG
Template Known Secondary structure 

.......TT

GGGTTSS

GGGT
SSSGGG


S


STT
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   209210 .........220.........230.........240.........250.........260.........270.........280.
 
   281........290.........300.........310.........320.........330.........340.........350.....
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Query Sequence  . . . . . DVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMF
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Template Sequence  KETYYELESLINSA. . . VFPGLQGGPHNHAIAGVAVALKQAXTTEFKIYQLQVLANCRALSDALTELGYKI. . . . . . . . .
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...TTTT

S

TSTT

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   282.......290..... ....300.........310.........320.........330.........340.........
 
   356...360.........370.........380.........390... ......400... ......410.........420
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Query Sequence  GIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYL. . . . . . . . . APSAFEAGFM. . . . . . SVAHSMEDINNTIDAAR
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Template Sequence  . . . VTGGSDNHLILXDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIH
Template Known Secondary structure  ...TTSS
SSSGGGGT

TT
B



SSSS
TTS
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   350.........360.........370.........380.........390.........400.........410.........420......
 
   421...
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Query Sequence  RVFA
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Template Conservation      
Template Sequence  RGIE
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   427..430
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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