Return to main results Retrieve Phyre Job Id

Job DescriptionP23893
Confidence99.91%DateThu Jan 5 11:40:26 GMT 2012
Rank137Aligned Residues340
% Identity9%Templated1eg5a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80..... ....90.........100.... .....110.........
Predicted Secondary structure 













........





.





Query SS confidence 




































. . . . . . . .


















.














Query Sequence  GKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSF. . . . . . . . GAPTEMEVKMAQLVTELVP. TMDMVRMVNSGTEAT
Query Conservation 
   

         


  
 
  
           ........         


 
     .    
    




 
Alig confidence 









......




















........


















.














Template Conservation    



    ......      
  
                          
  
  

         
    
 
 
 
Template Sequence  XRVYFDNNAT. . . . . . TRVDDRVLEEXIVFYREKYGNPNSAHGXGIEANLHXEKAREKVAKVLGVSPSEIFFTSCATESI
Template Known Secondary structure 


BTTT
......



T



TT
SSTS
GGGS
Template Predicted Secondary structure 




......

















Template SS confidence 















































































   1........10 .........20.........30.........40.........50.........60.........70....
 
   120.... .....130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure  .










































Query SS confidence 




.









































































Query Sequence  MSAIR. LARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEI
Query Conservation    

 . 
    

  

     


                                      
   
   
       
Alig confidence 




.















































..............











Template Conservation        
          
                                    ..............            
Template Sequence  NWILKTVAETFEKRKRTIITTPIEHKAVLETXKYLSXKGFKVKYVPVDSRGVVK. . . . . . . . . . . . . . LEELEKLVDEDT
Template Known Secondary structure  TTTT


TTS
TT


B
TTS
B
..............

TT
Template Predicted Secondary structure 


























..............




Template SS confidence 















































































   75....80.........90.........100.........110.........120........ .130.........140
 
   199200.........210.........220.........230.........240.........250.........260........ .270.......
Predicted Secondary structure 




































.






Query SS confidence 





































































.








Query Sequence  ACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIG. GGMPVGAFG
Query Conservation 



 


    
        
  
  
    
  

 


  
 
 
            

    
 
 . 
       
Alig confidence 
















....
















































.








Template Conservation                   ....                                          
 

  
  
   
   
Template Sequence  FLVSIXAANNEVGTIQP. . . . VEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIR
Template Known Secondary structure  SB
TTT
BB

....
TT

TTTTTTS



TTT

SGGGGTS
TT

Template Predicted Secondary structure 













....































Template SS confidence 















































































   141........150....... ..160.........170.........180.........190.........200.........210......
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  GRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGI
Query Conservation                     
    
    

                          
  
         
 
 
    
Alig confidence 







































..
























............
Template Conservation                                          ..                   
     ............ 
Template Sequence  KGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAXEIAVE. . ELSEAAKHXEKLRSKLVSGLXNLGA. . . . . . . . . . . . H
Template Known Secondary structure  TTS



SB
SS
TTTTTB
S


..TTTT
............
Template Predicted Secondary structure 














..


............
Template SS confidence 















































































   217..220.........230.........240.........250...... ...260.........270.........280. .
 
   358.360.........370.........380.........390...... ...400.........410.........420....
Predicted Secondary structure 















.............






Query SS confidence 






































. . . . . . . . . . . . .



























Query Sequence  FFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPS. . . . . . . . . . . . . AFEAGFMSVAHSMEDINNTIDAARRVFA
Query Conservation                              
   

   
 .............      

   
 



     
   
 
Alig confidence 






































.............



























Template Conservation                              
   

 
  
               



     
 


      
   
 
Template Sequence  IITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTHVLDAXGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS
Template Known Secondary structure 
S
TTSB
TT
TT

TT
B

TT



TT

Template Predicted Secondary structure 



































Template SS confidence 















































































   283......290.........300.........310.........320.........330.........340.........350.........360..
 
   425.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  KL
Query Conservation   
Alig confidence 

Template Conservation   
Template Sequence  FL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   375.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions