Job Description P23893 Confidence 99.83% Date Thu Jan 5 11:40:26 GMT 2012 Rank 197 Aligned Residues 307 % Identity 15% Template d1cl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.83

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	.	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D
Query Conservation																				.
Alig confidence																				.																		.																							.	.
Template Conservation																																						.																							.	.
Template Sequence		E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	.	G	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	.	.	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y	E	P	S	Q	D
Template Known Secondary structure										T	T	T	T	T					T	T	T																	.	T		S						S	S													.	.			T	T							T	T	S
Template Predicted Secondary structure																																						.																							.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																					.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																					.	.	.	.
Template Sequence		F	C	S	K	I	L	S	K	L	G	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	W	F	D	P	L	I	G	A	D	I	V	K	H	L	Q	.	.	.	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	.	.	.	.	V	P	A	I	V	A	A	V
Template Known Secondary structure						T	G	G	G	G	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		G	G	G	G	G	G	T			.	.	.	T	T								S	S		T	T	T						.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.																					.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.																	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.
		228	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure				.	.																																								.
Query SS confidence				.	.																																								.
Query Sequence		D	E	.	.	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	.	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A
Query Conservation				.	.																																								.
Alig confidence				.	.																					.	.	.																	.																					.	.	.
Template Conservation																										.	.	.																																						.	.	.
Template Sequence		R	S	V	V	P	D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	.	.	.	D	F	G	I	D	V	S	I	Q	A	A	T	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	.	.	.	N	A	Y	L	M	G	Q	M	V	D	A	D	T
Template Known Secondary structure						T	T								T	T	T	T	T	T	S	S		G	G	.	.	.	G	G	T		S										S		S	S	S										T	T	T							.	.	.					T	T
Template Predicted Secondary structure																										.	.	.																																						.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.																			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation														.	.	.	.	.	.																																																										.	.	.	.	.
Template Sequence		A	Y	I	T	S	R	G	L	R	T	L	G	.	.	.	.	.	.	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	.	.	.	.	.
Template Known Secondary structure										T	T			.	.	.	.	.	.																			T		T	T							T	T	S	T	T	S	T	T									S				S							S	S	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.																																																										.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.																										.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	E	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation		.	.	.	.	.	.																																																													.	.
Template Sequence		.	.	.	.	.	.	K	L	N	N	E	E	L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	.	.	E	D	V	D	D	L	I	A	D	L	D	A
Template Known Secondary structure		.	.	.	.	.	.												T	T		S	S		B			S				S	S	S														T	S	T	T							S									S	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.																																																													.	.
Template SS confidence
								318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.
		422	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	A	R	I
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions