Job Description P23893 Confidence 99.93% Date Thu Jan 5 11:40:26 GMT 2012 Rank 120 Aligned Residues 305 % Identity 15% Template c3pplB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of an aspartate transaminase (ncgl0237, cgl0240)2 from corynebacterium glutamicum atcc 13032 kitasato at 1.25 a3 resolution Resolution 1.25 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.													130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																							.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	.	.	.	.	.	.	.	.	.	.	.	.	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L
Query Conservation																							.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	Y	G	G	L	D	G	I	V	D	I	R	Q	I	W	A	D	L	L	G	V	P	V	E	Q	V	L	A	G	D	A	S	S	L	N	I	X	F	D	V	I	S	W	S	Y	I	F	G	N	N	D	S	V	Q	P	W	S	K	E	E	T	V	K	W	I	C	P	V	P	G	Y	D	R	H	F	S	I	T	E
Template Known Secondary structure		T	S	S			S	S														T	S		G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	.	L	C	D	E
Query Conservation																																																																													.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																																.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		R	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	X	I	S	V	P	X	N	E	D	G	P	D	X	D	A	V	E	E	L	V	K	.	.	N	P	Q	V	K	G	X	W	V	V	P	V	F	S	N	P	T	G	F	T	V	T	E	D	V	A	K	R	L	S	A	X	E	T	A	A
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T											T	T	.	.	S	T	T									S	S		T	T	T																		S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		151	.	.																	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.												.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	.	.	.	.	.	.	.	.	.	.	.	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		P	D	F	R	V	V	W	D	N	A	Y	A	V	H	T	L	T	D	E	F	P	E	V	I	D	I	V	G	L	G	E	A	A	G	N	P	N	R	F	W	A	F	T	S	T	S	K	I	T	L	A	G	A	G	V	S	F	F	L	T	S	A	E	N	R	K	W	Y	T	G	.	.	.	H	A	G	I	R	G	I
Template Known Secondary structure		T	T								T	T	T	T		B	S	S	S															T	T		T	T								S	T	T	T	S		T	T	T	S																	.	.	.							S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.						.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																		.	.	.	.	.																																				.
Query SS confidence																		.	.	.	.	.																																				.
Query Sequence		S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	.	.	.	.	.	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	.	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M
Query Conservation																		.	.	.	.	.																																				.
Alig confidence																		.	.	.	.	.																																				.															.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		G	P	N	K	V	N	Q	L	A	H	A	R	Y	F	G	D	A	E	G	V	R	A	V	X	R	K	H	A	A	S	L	A	P	K	F	N	K	V	L	E	I	L	D	S	R	L	A	E	Y	G	V	A	Q	W	T	V	P	A	G	G	Y	F	I	S	L	D	V	V	P	G	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	S																															G	G	G	T								S	B	S	S							S	T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.											400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.									.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.									.
Query Sequence		A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	E	.	.	.	.	.	.	.	.	.	.	A	G	F	M	S	V	A	H	.	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.									.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	S	R	V	A	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	Y	P	L	R	Q	D	P	E	N	K	N	L	R	L	A	P	S	L	P	P	V	E	E	L	E	V	A	X	D	G	V	A	T	C	V	L
Template Known Secondary structure		.	.	.	.	.	.											T	T						T	T	T	T	S	G	G	G			T	T	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions