Job Description P23893 Confidence 100.00% Date Thu Jan 5 11:40:26 GMT 2012 Rank 9 Aligned Residues 403 % Identity 24% Template c3oksB_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-aminobutyrate transaminase; PDBTitle: crystal structure of 4-aminobutyrate transaminase from mycobacterium2 smegmatis Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	S	E	N	L	Y	S	A	A	R	E	L	I	P	G	G	V	N	S	P	V	R	A	F	T	G	V	G	G	T	P	L	F	I	E	K	A	D	G	A	Y	L	Y	D	V	D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		P	R	S	Q	A	L	I	D	R	K	G	T	A	V	A	R	G	V	G	T	.	.	.	.	.	.	.	.	.	T	M	P	V	Y	A	V	R	A	G	G	G	I	V	E	D	V	D	G	N	R	L	I	D	L	G	S	G	I	A	V	T	T	V	G	N	S	A	P	K	V	V	E	A	V	R	S	Q	V	G	D
Template Known Secondary structure															S		T	T	S			.	.	.	.	.	.	.	.	.	S	S	S	S							T	T					T	T	S						S	S					T		T	T		T	T													T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																			.	.
Query SS confidence							.	.	.																			.	.
Query Sequence		G	L	S	F	G	.	.	.	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G
Query Conservation							.	.	.																			.	.
Alig confidence							.	.	.																			.	.
Template Conservation
Template Sequence		F	T	H	T	C	F	M	V	T	P	Y	E	G	Y	V	A	V	C	E	Q	L	N	R	L	T	P	V	R	G	D	K	R	S	A	L	F	N	S	G	S	E	A	V	E	N	A	V	K	I	A	R	S	H	T	H	K	P	A	V	V	A	F	D	H	A	Y	H	G	R	T	N	L	T	M	A	L	T	A	K	V
Template Known Secondary structure			S			T	T	T	T	S																S	S			S	S							S	S																									T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180													.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	.	.	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		M	P	Y	K	D	G	F	G	P	F	A	P	E	I	Y	R	A	P	L	S	Y	P	F	R	D	A	E	F	G	K	E	L	A	T	D	G	E	L	A	A	K	R	A	I	T	V	I	D	K	Q	I	G	A	D	N	L	A	A	V	V	I	E	P	I	Q	G	E	G	G	F	I	V	P	A	D	G	F	L	P	T
Template Known Secondary structure		T	T	T	T	T	T			S			S	S													G	G	G						T																	T		G	G	G								S	S	B	T	T	T	T		B				T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	.	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N
Query Conservation																							.
Alig confidence																							.																							.																								.	.	.
Template Conservation																																														.																								.	.	.
Template Sequence		L	L	D	W	C	R	K	N	D	V	V	F	I	A	D	E	V	Q	T	G	F	A	R	T	G	A	M	F	A	C	E	H	E	G	I	D	P	D	L	I	V	T	A	G	.	I	A	G	G	L	P	L	S	A	V	T	G	R	A	E	I	M	D	S	P	H	V	S	.	.	.	G	L	G	G	T	Y	G	G	N
Template Known Secondary structure									T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	T	T	T				S							.	T	T	T	T	S	S												T		S		T	T	.	.	.	S	S			S	S	S	S
Template Predicted Secondary structure																																														.																								.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		P	I	A	C	A	A	A	L	A	T	I	E	T	I	E	S	E	G	L	V	A	R	A	Q	Q	I	E	K	I	M	K	D	R	L	G	R	L	Q	A	E	D	D	R	I	G	D	V	R	G	R	G	A	M	I	A	M	E	L	V	K	A	G	T	T	.	.	.	.	.	.	.	E	P	D	A	D	L	T	K	A
Template Known Secondary structure																		T	T																								T	T								T	T							B	S	T	T	S		.	.	.	.	.	.	.		B
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.								390	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.					.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		F	F	H	M	M	L	D	E	G	V	Y	L	A	P	.	.	.	.	S	A	F	E	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		L	C	A	G	A	H	A	A	G	V	I	V	L	S	C	G	T	Y	G	N	V	V	R	F	L	P	P	L	S	I	G	D	D	L	L	N	E	G	L	D	V	L	E	E	V	L	R
Template Known Secondary structure									T	T								T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.