Job Description P23893 Confidence 100.00% Date Thu Jan 5 11:40:26 GMT 2012 Rank 45 Aligned Residues 339 % Identity 14% Template c3lwsF_ PDB info PDB header:lyase Chain: F: PDB Molecule:aromatic amino acid beta-eliminating PDBTitle: crystal structure of putative aromatic amino acid beta-2 eliminating lyase/threonine aldolase. (yp_001813866.1) from3 exiguobacterium sp. 255-15 at 2.00 a resolution Resolution 2.00 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	.	.	.	.	.	G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I
Query Conservation																																			.	.	.	.	.
Alig confidence																				.															.	.	.	.	.																								.
Template Conservation																				.																																											.
Template Sequence		X	N	R	L	R	T	S	F	Q	Q	T	T	G	Q	I	S	G	H	.	G	K	R	N	V	G	V	L	K	T	A	F	A	A	V	A	D	E	X	A	S	D	Q	Y	G	T	G	A	I	I	E	P	F	E	Q	K	F	A	D	V	L	G	.	X	D	D	A	V	F	F	P	S	G	T	X	A	Q	Q	V	A	L
Template Known Secondary structure											T		S			S	S	B	S	.	S												T	T	S		T	T						T	T			T	T												T	T	.		S						S
Template Predicted Secondary structure																				.																																											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V
Query Conservation
Alig confidence										.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation										.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		R	I	W	S	D	E	T	D	.	N	R	T	V	A	Y	H	P	L	C	H	L	E	I	H	E	Q	D	G	L	K	E	L	H	P	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	L	V	G	A	A	D	R	L	X	T	L	D	E	I	K	A	L	.	P	D	I	A	C	L	L	L
Template Known Secondary structure									T	.								T	T						S	S	T	T						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S		T	T	S											.		S		S
Template Predicted Secondary structure										.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		79	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	.	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		E	L	P	Q	R	E	I	G	G	V	A	P	A	F	S	E	L	E	T	I	S	R	Y	C	R	E	R	G	I	R	L	H	L	D	G	A	R	L	F	E	X	L	P	Y	Y	E	K	T	A	A	E	I	A	G	L	F	D	S	I	Y	I	S	F	Y	G	L	G	G	I	A	G	A	I	L	A	G	P	A	A	F
Template Known Secondary structure			S	S	B	G	G	G	T	S	B																		T								T	T									T								T	T		S												S	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A
Query Conservation
Alig confidence																																			.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Q	T	A	R	I	W	K	R	R	Y	G	G	D	L	I	S	L	Y	P	Y	I	V	S	A	D	Y	Y	Y	E	L	R	K	.	.	.	D	R	X	G	Q	Y	Y	E	Q	A	K	Q	L	A	E	Q	F	N	A	L	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	T	T	P	E	V	P
Template Known Secondary structure													T				S																	T	.	.	.	T																			S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S
Template Predicted Secondary structure																																			.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.															.	.	.	280	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.						.	.	.	400	.	.	.	.	.	.						.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.											.	.	.	.	.
Query SS confidence																																				.	.	.	.	.											.	.	.	.	.
Query Sequence		E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	.	.	.	.	.	A	F	E	A	G	F	M	S	V	A	.	.	.	.	.	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A
Query Conservation																																				.	.	.	.	.											.	.	.	.	.
Alig confidence																																				.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		V	S	N	X	F	H	L	H	F	D	G	Q	A	A	D	I	S	P	K	L	E	Q	V	Q	E	E	T	G	L	G	F	V	G	Y	L	V	D	K	D	G	Y	C	S	T	E	I	S	V	G	D	A	Y	G	E	L	D	Q	Q	T	R	D	A	G	F	A	R	L	R	Q	A	F	S
Template Known Secondary structure		S	S	S								S																				S		S						S	S								B						T	S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions