Job Description P23893 Confidence 99.96% Date Thu Jan 5 11:40:26 GMT 2012 Rank 66 Aligned Residues 342 % Identity 11% Template c3l8aB_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative aminotransferase, probable beta-cystathionase; PDBTitle: crystal structure of metc from streptococcus mutans Resolution 1.54 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																									.	.																			.	.	.
Query SS confidence																																									.	.																			.	.	.
Query Sequence		D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	.	.	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	.	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A
Query Conservation																																									.	.																			.	.	.
Alig confidence																			.	.	.																				.	.																			.	.	.
Template Conservation																			.	.	.
Template Sequence		N	N	P	E	L	L	Q	M	W	V	A	D	M	D	F	L	P	.	.	.	V	P	E	I	K	E	A	I	I	N	Y	G	R	E	H	I	F	G	Y	N	Y	F	N	D	D	L	Y	Q	A	V	I	D	W	E	R	K	E	H	D	Y	A	V	V	K	E	D	I	L	F	I	D	G	V	V	P	A	I	S	I	A
Template Known Secondary structure		T		T	T						S	S				S			.	.	.																	S	S																										G	G	G					S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I
Query Conservation
Alig confidence							.	.																.																											.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation							.	.																.																											.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		L	Q	A	F	S	.	.	E	K	G	D	A	V	L	I	N	S	P	V	Y	Y	P	.	F	A	R	T	I	R	L	N	D	H	R	L	V	E	N	S	L	Q	I	I	N	G	R	F	E	I	.	.	.	.	.	.	.	.	.	.	.	D	F	E	Q	L	E	K	D	I	I	.	.	.	D	N	N	V	K	I	Y
Template Known Secondary structure						S	.	.		T									S					.								T	T												T	T					.	.	.	.	.	.	.	.	.	.	.											.	.	.		T	T
Template Predicted Secondary structure							.	.																.																											.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		102	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.												.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.								260	.	.	.	.	.	.	.	.		.	270	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.										.
Query SS confidence																																																											.	.	.	.	.	.	.										.
Query Sequence		V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	.	.	.	.	.	.	.	L	T	C	L	G	K	I	I	G	.	G	G	M	P	V	G
Query Conservation																																																											.	.	.	.	.	.	.										.
Alig confidence																																																											.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		L	L	C	S	P	H	N	P	G	G	R	V	W	D	N	D	D	L	I	K	I	A	E	L	C	K	K	H	G	V	I	L	V	S	D	E	I	H	Q	D	L	A	L	F	G	N	T	H	H	S	L	N	T	L	D	A	S	Y	K	D	F	T	I	I	L	S	S	A	T	K	T	F	N	I	A	G	T	K	N	S
Template Known Secondary structure					S	S	B	T	T	T	T	B																		T								T	T	T	T		B		T	T						G	G	G	S		T	T	G	G	G	T							S					T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	.	G	I	P	L	V	V	N	H	V	G	G
Query Conservation																																																																						.
Alig confidence																.	.	.																																																				.
Template Conservation																.	.	.
Template Sequence		F	A	I	I	Q	N	E	S	L	R	R	K	F	Q	.	.	.	Y	R	Q	L	A	N	N	Q	H	E	V	P	T	V	G	M	I	A	T	Q	A	A	F	Q	Y	G	K	P	W	L	E	E	L	K	T	V	I	E	G	N	I	K	L	V	I	K	E	L	E	A	K	T	K	I	K	V	M	E	P	E	G	T	Y
Template Known Secondary structure							S									.	.	.						T	T		S																																											S	S							S	B	S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.							.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																																						.								.	.	.	.	.	.
Query SS confidence																																						.								.	.	.	.	.	.
Query Sequence		M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	.	G	V	Y	L	A	P	S	.	.	.	.	.	.	A	F	E	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K
Query Conservation																																						.								.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.										.								.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	W	L	D	F	S	A	Y	A	I	A	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	S	E	K	L	Q	N	E	A	K	V	V	L	N	D	G	A	H	F	G	K	E	G	K	Y	F	A	R	L	N	V	A	T	P	K	N	T	V	Q	E	A	L	S	R	I	I	S	V	F	G	K
Template Known Secondary structure								G	G	G	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.									T	S							G	G	G	G		G	G	G	T	T								S																S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.														.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions