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Job DescriptionP23893
Confidence99.96%DateThu Jan 5 11:40:26 GMT 2012
Rank69Aligned Residues343
% Identity10%Templatec3kaxB_
PDB info PDB header:lyaseChain: B: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative c-s lyase from bacillus anthracis
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YDVDG. KAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFG. . APTEMEVKMAQLVTELVP. . . TMDMVRMVNSGTEA
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Template Sequence  WDTYKNEELIHA. . WIADXDFEV. PQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA
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   18.20......... 30........ .40.........50.........60.........70.........80.........90....
 
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Query Sequence  TMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEI
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Template Sequence  LSTSIQAF. . . TKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAI. . . . . . . . . . . DFEHLEKQFQQGVK. .
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   95....100.. .......110.........120.........130.........140.... .....150........
 
   199200.........210.........220.........230.........240...... ...250.........260........ .270
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Query Sequence  ACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVA. . . . . . . LAGAQDYYGVVPDLTCLGKIIG. GG
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Template Sequence  . . LXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCXAPSKTFNIAG
Template Known Secondary structure  ..SSBTTTTB


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   159160.........170.........180.........190.........200.........210.........220.........230......
 
   271........280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  MPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNH
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Template Sequence  LQASIIIIPNEKLRQAFTS. . . IQYRQGFHGLNIFAYTAXQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVXK
Template Known Secondary structure  G




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   237..240.........250..... ....260.........270.........280.........290.........300.........310...
 
   351 ........360.........370.........380......... 390...... ...400.........410.........420.
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Query Sequence  V. . GGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDE. GVYLAPS. . . . . . AFEAGFMSVAHSMEDINNTIDAARR
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Template Sequence  PEGSFLLWIDCSALNLS. . . . . . . . . . . . . QDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRH
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   314.....320.........330 .........340.........350.........360.........370.........380
 
   422..
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Query Sequence  VFA
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Template Sequence  TFS
Template Known Secondary structure  T
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   381..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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