Job Description P23893 Confidence 99.94% Date Thu Jan 5 11:40:26 GMT 2012 Rank 91 Aligned Residues 329 % Identity 16% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	.	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R
Query Conservation																																																											.	.	.
Alig confidence													.	.							.														.	.	.	.	.	.																			.	.	.
Template Conservation													.	.							.														.	.	.	.	.	.
Template Sequence		A	G	R	R	I	I	H	X	E	V	G	.	.	Q	P	G	T	G	A	.	P	R	G	A	V	E	A	L	A	K	S	L	E	.	.	.	.	.	.	G	L	P	A	L	R	Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S	G	G	F	L	L	A	F	T
Template Known Secondary structure		T	T									S	.	.	S		S	S		S	.														.	.	.	.	.	.																							G	G	G					S	S
Template Predicted Secondary structure													.	.							.														.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E
Query Conservation
Alig confidence				.	.																			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	.	.	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	.	Q	I	L	R	A	L	G	L	V	P	V	D	L	P	T	A	P	E	N	R	L	Q	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	D	F	A	G	L	D	L	A	G	L	X	V	A
Template Known Secondary structure				.	.			T	T								S							.						T	T										G	G	G	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S			S
Template Predicted Secondary structure				.	.																			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																													.	.																						.
Query SS confidence																																													.	.																						.
Query Sequence		P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	.	.	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	.	G	G	M	P	V	G	A	F	G	G	R	R	D
Query Conservation																																													.	.																						.
Alig confidence			.																																										.	.																						.
Template Conservation			.
Template Sequence		S	.	P	A	N	P	T	G	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	L	E	L	T	D	E	C	Y	V	I	N	S	F	S	K	Y	F	S	X	T	G	W	R	V	G	W	X	V	V	P	E	D
Template Known Secondary structure		S	.	S		T	T	T																			T	T								T	T	T	T		B	S	S	S					G	G	G	T		S	S	S						S	S	S	T	T			T	T	S									G	G
Template Predicted Secondary structure			.
Template SS confidence
		169		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D
Query Conservation
Alig confidence									.	.	.																							.	.
Template Conservation									.	.	.																							.	.
Template Sequence		Q	V	R	V	V	E	R	.	.	.	I	A	Q	N	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	D	.	.	C	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	T	R	I	A	P	P	D	G	A	F	Y	V	Y	A	D	V	S	D
Template Known Secondary structure		G							.	.	.					T	T															T	T	.	.																											T				B					B	T	T							T	T
Template Predicted Secondary structure									.	.	.																							.	.
Template SS confidence
		248	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.								.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																														.								.	.	.	.	.	.	.
Query SS confidence																														.								.	.	.	.	.	.	.
Query Sequence		A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	.	G	V	Y	L	A	P	S	.	.	.	.	.	.	.	A	F	E	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K
Query Conservation																														.								.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.												.								.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	S	Y	A	R	A	T	A	D	I	E	E	G	L	D	R	L	E	A	F	X	Q	A
Template Known Secondary structure		T		S		.	.	.	.	.	.	.	.	.	.	.	.	.																			G	G	G	T		T	T	T	G	G	G								S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.														.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions