Job Description P23893 Confidence 99.91% Date Thu Jan 5 11:40:26 GMT 2012 Rank 139 Aligned Residues 307 % Identity 17% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.												.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																							.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	.	.	.	.	.	.	.	.	.	.	.	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V
Query Conservation																							.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																									.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																																											.
Template Sequence		N	Y	P	G	G	V	A	G	L	P	S	A	R	A	L	F	A	G	Y	L	D	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G	L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	.	H	F	L	L	L	Q
Template Known Secondary structure		S	S		S		T	T													T	T	S		G	G	G					S	S																T			T	T		S	S		G	G	G	G									S					.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	.	C	D	E	F
Query Conservation																																																																													.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																																.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		T	L	G	F	E	L	L	T	V	D	X	Q	S	D	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	D	A	V	E	R	L	A	G	T	D	.	P	S	V	K	G	I	L	F	V	P	T	Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P
Template Known Secondary structure				T										T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S		.	T	T								S	S	S		T	T	T														T				S	S	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.													.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		D	F	T	I	F	A	D	D	A	Y	R	V	H	H	L	V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L	G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	.	.	.	Y	L	G	A	Q	S	I
Template Known Secondary structure		T								T	T	S	S		B			S	S	S															T		T	T	S							S	T	T	T	S		S	S	S	S																	.	.	.					S		S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.							.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																	.	.	.	.	.	.																																				.	.
Query SS confidence																	.	.	.	.	.	.																																				.	.
Query Sequence		S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	.	.	.	.	.	.	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	.	.	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D
Query Conservation																	.	.	.	.	.	.																																				.	.
Alig confidence																	.	.	.	.	.	.																																				.	.																.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		G	P	N	K	V	E	Q	A	R	H	V	K	F	L	T	E	Y	P	G	G	L	E	G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L	P	K	G	G	Y	F	I	S	L	D	T	A	E	P	V	.	.	.	.	.	.	.
Template Known Secondary structure																		S	T	T																													T	T	T	T	S	S							S	B	S	S							S	S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.											400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.								.
Query Sequence		V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	E	.	.	.	.	.	.	.	.	.	.	A	G	F	M	S	V	A	.	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K
Query Conservation																															.	.	.	.	.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.								.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L	T	P	A	G	A	T	Y	P	A	G	Q	D	P	H	N	R	N	L	R	L	A	P	T	R	P	P	V	E	E	V	R	T	A	X	Q	V	V	A	A	C	I	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.											T	T						T	T	T	T	S	S	T	T			S	S	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions