Job Description P23893 Confidence 99.82% Date Thu Jan 5 11:40:26 GMT 2012 Rank 201 Aligned Residues 299 % Identity 15% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D
Query Conservation
Alig confidence																						.																																								.	.																	.	.
Template Conservation																						.																																								.	.																	.	.
Template Sequence		S	R	A	V	L	D	A	Q	G	S	V	L	T	N	K	Y	A	E	G	Y	.	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	A	.	.	K	P	G	D	T	V	L	G	M	S	L	F	N	A	L	Q	.	.
Template Known Secondary structure										T	S	G	G	G	S	S		T	T			.															T	T		S							S	S														.	.		T	T														.	.
Template Predicted Secondary structure																						.																																								.	.																	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.						.	.									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.						.	.									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	S	L	.	.	I	I	A	G	F	.	.	S	A	Y	P	R	K	L	D	.	.	.	.	F	A	R	F	R	A	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B		T	T	T		S	B															S		.	.						.	.	S			S	S				.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.						.	.									.	.	.	.
Template SS confidence
																											149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.			180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	.	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A
Query Conservation																		.
Alig confidence																		.																																																.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	H	A	H	V	V	T	S	T	T	H	K	T	L	R	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	S	A	V	.	.	.	.	.	G	P	L	M	H	V	I	A	G	K	A
Template Known Secondary structure				T	T								T	T	T						T	T	S	S			G	G	G	T		S						S	S	G	G	G		S		S							S													.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	.	R	F	K	R	F	F	H	M
Query Conservation																																																																									.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A
Template Known Secondary structure								T	S																								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G	S		S	S	S							G	G	G	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.											.	.	.	.	.	.	400	.	.	.							.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		M	L	D	E	G	V	Y	L	.	.	.	.	.	.	.	.	.	.	A	P	S	A	F	E	A	G	F	M	.	.	.	.	.	.	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K	L
Query Conservation										.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	R	A	G	I	T	C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A	L
Template Known Secondary structure					T	T									T	T		S	S		T	T	T		S												T	T
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions