Job Description P23893 Confidence 99.82% Date Thu Jan 5 11:40:26 GMT 2012 Rank 203 Aligned Residues 287 % Identity 16% Template c3e6gA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae Resolution 2.80 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G
Query Conservation
Alig confidence																								.																				.	.	.																													.	.	.	.	.	.	.
Template Conservation																								.																				.	.	.																													.	.	.	.	.	.	.
Template Sequence		Y	A	Q	S	S	T	H	N	P	T	R	F	A	Y	E	R	C	V	A	A	L	E	.	G	G	T	R	A	F	A	F	A	S	G	M	A	A	T	S	T	V	M	.	.	.	E	L	L	D	A	G	S	H	V	V	A	M	D	D	L	Y	G	G	T	F	R	L	F	E	R	V	R	R	.	.	.	.	.	.	.
Template Known Secondary structure																								.	T		S						S	S										.	.	.	T	T	S		T	T							S	S															.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																				.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	R	T	A	G	L	D	F	S	F	V	D	L	T	D	P	A	A	F	K	A	A	I	R	.	.	.	A	D	T	K	M	V	W	I	E	T	P	T	N	P	M	L	K	L	V	D	.	.	.	.	I	A	A	I	A	V	I	A	R	K	H	G	L	L	T	V	V	D	N	T	F	A
Template Known Secondary structure		.	.	.	.	.	.	.	.												T	T											.	.	.	T	T								S	S		T	T	T						.	.	.	.											T	T								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.
Template SS confidence
										125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	.	.	.	.	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q
Query Conservation																														.	.	.	.
Alig confidence										.	.	.																		.	.	.	.																			.	.	.	.	.
Template Conservation										.	.	.																																								.	.	.	.	.
Template Sequence		S	P	M	L	Q	R	P	L	.	.	.	S	L	G	A	D	L	V	V	H	S	A	T	K	Y	L	N	G	H	S	D	M	V	G	G	I	A	V	V	G	D	N	A	E	L	A	E	Q	M	A	.	.	.	.	.	F	L	Q	N	S	I	G	G	V	Q	G	P	F	D	S	F	L	A	L	R	G	L	K	T	L
Template Known Secondary structure			T	T	T			G	G	.	.	.	G	G	T		S						T	T	T	T	T	T		S	S	S										S										.	.	.	.	.									B														T	T
Template Predicted Secondary structure										.	.	.																																								.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.																				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T	H	P	A	I	E	K	V	I	Y	P	G	L	A	S	H	P	Q	H	V	L	A	K	R	Q	M	.	.	.	.	.	S	G	F	G	G	I	V	S	I	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	G	F	D	A
Template Known Secondary structure																					T		T	T							T	T	S	T	T	S	T	T									.	.	.	.	.	S	S			S							.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																															.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.														.	.	320	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.																												.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																																										.	.
Template Sequence		A	K	R	F	C	E	K	T	E	L	F	T	L	A	E	S	L	G	G	V	E	S	L	V	N	H	P	A	V	M	T	H	A	S	I	P	V	A	R	R	E	Q	L	G	I	S	D	A	L	V	R	L	S	V	G	I	.	.	E	D	L	G	D	L	R	G	D	L	E	R	A
Template Known Secondary structure										S	S	S				S					S	S						T	T	T	T	T	T		S	S			T	T	T	T	T	S	S			S	S								S	.	.	S										T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions