Job Description P23893 Confidence 100.00% Date Thu Jan 5 11:40:26 GMT 2012 Rank 19 Aligned Residues 398 % Identity 25% Template c3dxvA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:alpha-amino-epsilon-caprolactam racemase; PDBTitle: the crystal structure of alpha-amino-epsilon-caprolactam racemase from2 achromobacter obae Resolution 2.21 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	L	Y	S	A	A	R	E	L	I	P	G	G	V	N	S	P	V	R	A	F	T	G	V	G	G	T	P	L	F	I	E	K	A	D	G	A	Y	L	Y	D	V	D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		K	A	L	Y	D	R	D	G	A	A	I	G	N	L	.	.	.	.	.	.	.	.	Q	K	L	R	F	F	P	L	A	I	S	G	G	R	G	A	R	L	I	E	E	N	G	R	E	L	I	D	L	S	G	A	W	G	A	A	S	L	G	Y	G	H	P	A	I	V	A	A	V	S	A	A	A	A	N	P	A	G
Template Known Secondary structure												S		G	G	.	.	.	.	.	.	.	.	G				S	S									B	T					T	T	S						S	S	T	T	T	T	T		T	T		B	S														S		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.									.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		85	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																			.	.
Query SS confidence				.	.	.																			.	.
Query Sequence		F	G	.	.	.	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T
Query Conservation				.	.	.																			.	.
Alig confidence				.	.	.																			.	.
Template Conservation
Template Sequence		A	T	I	L	S	A	S	N	A	P	A	V	T	L	A	E	R	L	L	A	S	F	P	G	E	G	T	H	K	I	W	F	G	H	S	G	S	D	A	N	E	A	A	Y	R	A	I	V	K	A	T	G	R	S	G	V	I	A	F	A	G	A	Y	H	G	C	T	V	G	S	M	A	F	S	G	L	I	L	L	P
Template Known Secondary structure		S		S	S	S	S															T	T	T		T	T	T							S	S																	S								T	T					S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V
Query Conservation
Alig confidence																			.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		Y	P	D	P	Y	R	P	Y	R	N	D	P	T	G	D	A	I	.	.	.	.	.	.	L	T	L	L	T	E	K	L	A	A	V	P	A	G	S	I	G	A	A	F	I	E	P	I	Q	S	D	G	G	L	I	V	P	P	D	G	F	L	R	K	F	A	D	I	C	R	A	H	G	I	L	V	V	C	D	E	V
Template Known Secondary structure					S	S	S		B	T	T	B	T	T	S				.	.	.	.	.	.										T	S		T	T									S	S	B	S	T	T	T	S	B				T	T												T	T								T
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		M	T	G	F	.	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P
Query Conservation						.
Alig confidence						.																																														.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		K	V	G	L	A	R	S	G	R	L	H	C	F	E	H	E	G	F	V	P	D	I	L	V	L	G	K	G	L	G	G	G	L	P	L	S	A	V	I	A	P	A	E	I	L	D	C	A	S	A	.	.	.	.	F	A	M	Q	T	L	H	G	N	P	I	S	A	A	A	G	L	A	V	L	E	T	I	D	R	D
Template Known Secondary structure		T	T		T	T	T	T	S	S	S	S	G	G	G	G	T	T				S						G	G	G	G	T	T	S													T	S		S	S	.	.	.	.	S	S			T	T	T	T																		T
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F
Query Conservation
Alig confidence																																																		.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.
Template Sequence		D	L	P	A	M	A	E	R	K	G	R	L	L	R	D	G	L	S	E	L	A	K	R	H	P	L	I	G	D	I	R	G	R	G	L	A	C	G	M	E	L	V	C	D	R	Q	S	R	.	.	.	.	.	.	E	P	A	R	A	E	T	A	K	L	I	Y	R	A	Y	Q	L	G	L	V	V	Y	Y	V	G	M
Template Known Secondary structure		T																								T	T								T	T										T	T	T	T	.	.	.	.	.	.																		T							S	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		399					400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		E	.	.	.	.	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K	L
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		N	G	N	V	L	E	F	T	P	P	L	T	I	T	E	T	D	I	H	K	A	L	D	L	L	D	R	A	F	S	E	L
Template Known Secondary structure		T	S									T	T																			T	G
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.