Job Description P23893 Confidence 99.90% Date Thu Jan 5 11:40:26 GMT 2012 Rank 149 Aligned Residues 306 % Identity 13% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130													.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																							.																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	.	.	.	.	.	.	.	.	.	.	.	.	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L
Query Conservation																							.																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																											.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																												.
Template Sequence		R	N	Y	G	G	L	L	G	I	A	D	I	R	E	L	W	A	E	A	L	G	L	P	A	D	L	V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	R	.	H	F	T	I	T
Template Known Secondary structure		T	S	S			S	S														T			G	G	G					S	S																			T	T		S	S		G	G	G	S	S									S					.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		E	H	F	G	F	E	X	I	N	V	P	X	T	D	E	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	X	G	V	V	R	E	L	V	K	.	.	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A
Template Known Secondary structure				T	T										T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	.	.	S	T	T									S	S		T	T	T																		S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
			231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	.	.	.	.	.	.	.	.	.	.	.	A	G	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	G	G	M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L
Query Conservation		.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																		.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W	F	X	S	S	T	S	K	I	T	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	.	.	.	H	A	N	V	R	G	I
Template Known Secondary structure		T	T								T	T	T	T		B	S	S	S																T		T	T								S	T	T	T	S		T	T	S	S																	.	.	.							S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																	.	.	.	.	.																																								.
Query SS confidence																	.	.	.	.	.																																								.
Query Sequence		S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	.	.	.	.	.	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	.	G	M	F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M
Query Conservation																	.	.	.	.	.																																								.
Alig confidence																	.	.	.	.	.																																								.												.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		G	P	N	K	L	N	Q	L	A	H	A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L	D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	G	T	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	S																															G	G	G		S							S	B	S	S							S	T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400											.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.								.
Query Sequence		A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	E	A	.	.	.	.	.	.	.	.	.	.	G	F	M	S	V	A	H	.	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K
Query Conservation																														.	.	.	.	.	.	.	.	.	.								.
Alig confidence		.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.								.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	S	R	V	V	E	L	A	K	E	A	G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P	N	N	E	N	I	R	L	A	P	S	L	P	P	V	A	E	L	E	V	A	X	D	G	F	A	T	C	V	L	X
Template Known Secondary structure		.	.	.	.	.	.											T	T						T	T	T	T	S	G	G	G			T	T	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions