 |
Job Description | P23893 | Confidence | 28.15% | Date | Thu Jan 5 11:40:26 GMT 2012 |
Rank | 358 | Aligned Residues | 53 |
% Identity | 9% | Template | c3bgwD_ |
PDB info |
PDB header:replication | Chain: D: PDB Molecule:dnab-like replicative helicase; |
PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase
|
Resolution | 3.91 Å |
|
 |
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | S | V | R | A | A | F | E | Q | Y | P | Q | E | I | A | C | I | I | V | E | P | V | A | G | N | M | N | C | V | P | P | L | P | . |
. |
. |
. |
. |
. |
E | F | L | P | G | L | R | A | L | C | D | E | F | G | A | L | L | I | I |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |
|   |
|
|   |
Template Sequence |   |
W | S | K | T | R | Q | T | K | R | K | N | P | G | K | R | V | I | V | M | I | D | Y | L | Q | L | L | E | P | A | K | A | N | D | S | R | T | N | Q | I | S | Q | I | S | R | D | L | K | K | M | A | R | E | L | D | V | V | V | I | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S |
| S | S |
|  |  |  |  |  |  |
| S | S | S | S | B |
| S |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|