Job Description P23893 Confidence 99.96% Date Thu Jan 5 11:40:26 GMT 2012 Rank 57 Aligned Residues 366 % Identity 14% Template c3b46B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase bna3; PDBTitle: crystal structure of bna3p, a putative kynurenine2 aminotransferase from saccharomyces cerevisiae Resolution 2.00 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																										.																				.	.	.	.	.	.	.
Query SS confidence																																										.																				.	.	.	.	.	.	.
Query Sequence		D	V	D	G	K	A	Y	I	D	Y	V	G	S	W	G	P	M	V	L	G	H	N	H	P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	.	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	P	.	.	.	.	.	.	.	T	M	D	M	V	R	M	V	N	S	G	T	E
Query Conservation																																										.																				.	.	.	.	.	.	.
Alig confidence															.	.						.																				.																				.	.	.	.	.	.	.
Template Conservation															.	.						.
Template Sequence		N	N	Q	G	R	E	L	I	N	L	G	Q	G	.	.	F	F	S	Y	S	.	P	P	Q	F	A	I	K	E	A	Q	K	A	L	D	I	P	M	V	N	Q	Y	S	P	T	R	G	R	P	S	L	I	N	S	L	I	K	L	Y	S	P	I	Y	N	T	E	L	K	A	E	N	V	T	V	T	T	G	A	N	E
Template Known Secondary structure				T	T	S									.	.	S		S	S		.													T	T	S	G	G	G	G	S				T	T																	T	T	S				G	G	G					S
Template Predicted Secondary structure															.	.						.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E
Query Conservation
Alig confidence												.	.																																																			.	.	.											.	.	.
Template Conservation												.	.																																																			.	.	.											.	.	.
Template Sequence		G	I	L	S	C	L	M	G	L	L	.	.	N	A	G	D	E	V	I	V	F	E	P	F	F	D	Q	Y	I	P	N	I	E	L	C	G	G	K	V	V	Y	V	P	I	N	P	P	K	E	L	D	Q	R	N	T	R	G	E	E	W	T	I	.	.	.	D	F	E	Q	F	E	K	A	I	T	.	.	.	S	K
Template Known Secondary structure												.	.		T	T								S			T	T								T	T												T	T	T	T	T	S		B		G	G	G	S			.	.	.								T			.	.	.	T	T
Template Predicted Secondary structure												.	.																																																			.	.	.											.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.				.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270
Predicted Secondary structure																																																						.	.	.	.	.																				.	.
Query SS confidence																																																						.	.	.	.	.																				.	.
Query Sequence		I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F	L	P	G	L	R	A	L	C	D	E	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	.	.	.	.	.	A	Q	D	Y	Y	G	V	V	P	D	L	T	C	L	G	K	I	I	G	.	.	G	G
Query Conservation																																																						.	.	.	.	.																				.	.
Alig confidence										.																																												.	.	.	.	.																				.	.
Template Conservation										.
Template Sequence		T	K	A	V	I	I	N	T	.	P	H	N	P	I	G	K	V	F	T	R	E	E	L	T	T	L	G	N	I	C	V	K	H	N	V	V	I	I	S	D	E	V	Y	E	H	L	Y	F	T	D	S	F	T	R	I	A	T	L	S	P	E	I	G	Q	L	T	L	T	V	G	S	A	G	S	F	A	A	T	G	W
Template Known Secondary structure									S	.	S		T	T	T																				T								T	T	T	T		B		S	S					G	G	G	S						T	T											S		T	T	S
Template Predicted Secondary structure										.
Template SS confidence
		199	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	V	G	A	F	G	G	R	R	D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		R	I	G	W	V	L	S	L	N	A	E	L	L	S	Y	A	A	K	.	.	.	A	H	T	R	I	C	F	A	S	P	S	P	L	Q	E	A	C	A	N	S	I	N	D	A	L	K	I	G	Y	F	E	K	M	R	Q	E	Y	I	N	K	F	K	I	F	T	S	I	F	D	E	L	G	L	P	Y	T	A	P	E
Template Known Secondary structure									S											.	.	.						T	S	S																				T																								T							S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.												.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	G	M	F	G	I	F	F	T	.	.	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	.	.	.	.	.	.	.	.	.	.	.	F	E	A	G	F	M	S	V	A	H	S	M	E	D	I	N	N	T	I	D
Query Conservation												.	.																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	Y	F	V	L	V	D	F	S	K	V	K	I	P	E	D	Y	P	Y	P	E	E	I	L	N	K	G	K	D	F	R	I	S	H	W	L	I	N	E	L	G	V	V	A	I	P	P	T	E	F	Y	I	K	E	H	E	K	A	A	E	N	L	L	R	F	A	V	C	K	D	D	A	Y	L	E	N	A	V	E
Template Known Secondary structure		B	S	S							T	T	S				T	T					G	G	G	T	S	S																			B		G	G	G	G	S		G	G	G	G	G	G	G	T	T								S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		418	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	R	V	F	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	K	L	L	K	D	Y	L
Template Known Secondary structure				G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions