Job Description P23893 Confidence 99.92% Date Thu Jan 5 11:40:26 GMT 2012 Rank 133 Aligned Residues 328 % Identity 14% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.										.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.
Query Sequence		P	A	I	R	N	A	V	I	E	A	A	E	R	G	L	S	F	G	A	P	T	E	M	E	V	K	M	A	Q	L	V	T	E	L	V	.	.	.	.	.	.	.	.	.	P	T	M	D	M	V	R	M	V	N	S	G	T	E	A	T	M	S	A	I	R	L	A	R	G	F	T	G	R	D	K	I	I	K	F	E
Query Conservation																																					.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																																																						.	.
Template Sequence		S	S	L	D	A	M	F	N	D	L	T	P	D	E	I	F	P	Y	A	P	P	Q	G	I	E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	V	.	.	N	Q	D	D	T	I	L	L	P	E
Template Known Secondary structure						T	T		S	S			G	G	G	T	S	S				T	T																		T	T			G	G	G	B							S															.	.		T	T							S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	Y	H	G	H	A	D	C	L	L	V	K	A	G	S	G	A	L	T	L	G	Q	P	N	S	P	G	V	P	A	D	F	A	K	Y	T	L	T	C	T	Y	N	D	L	A	S	V	R	A	A	F	E	Q	Y	P	Q	E	I	A	C	I	I	V	E	P	V	A	G	N	M	N	C	V	P	P	L	P	E	F
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		H	N	W	G	N	Y	K	L	V	F	N	T	R	N	G	A	N	L	Q	T	Y	P	I	F	D	K	D	G	H	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	I	M	I	L	N	Y	P	.	N	N	P	T	G	Y	T	P	T	H	K	E
Template Known Secondary structure		S			T							T	T	T	T										B		T	T	S		B	.	.	.	.	.	.	.	.	.	.	.	.	.		S												S	S								S	S	.		T	T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.														.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.											.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.				.	280
Predicted Secondary structure												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.													.											.	.	.
Query SS confidence												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.													.											.	.	.
Query Sequence		L	P	G	L	R	A	L	C	D	E	.	.	.	.	.	F	G	A	L	L	I	I	D	E	V	M	T	G	F	R	V	A	L	A	G	A	Q	D	Y	Y	G	V	.	.	.	.	.	.	.	.	.	.	V	P	D	L	T	C	L	G	K	I	I	G	.	G	G	M	P	V	G	A	F	G	G	.	.	.	R	R
Query Conservation												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.													.											.	.	.
Alig confidence												.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.													.											.	.	.
Template Conservation
Template Sequence		V	T	T	I	V	E	A	I	K	A	L	A	N	K	G	T	K	V	I	A	V	V	D	D	A	Y	Y	G	L	F	Y	E	D	V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	G	F	R	V	G	F	M	T	F	G	T	S	D	Q
Template Known Secondary structure															T	T										T	T	T	T		B		S	S				S								T	T			T	T													T	T		G	G	G								B
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.							.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.
Query Sequence		D	V	M	D	A	L	A	P	T	G	P	V	Y	Q	A	G	T	L	S	G	N	P	I	A	M	A	A	G	F	A	C	L	.	.	.	.	.	.	N	E	V	A	Q	P	G	V	H	E	T	L	D	E	L	T	T	R	L	A	E	G	L	L	E	A	A	E	E	A	G	I	P	L	V	V	N	H	V	G	G	M
Query Conservation																																		.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	K	E	V	L	E	A	K	V	K	G	L	I	R	S	N	I	S	S	G	P	L	P	T	Q	S	A	V	K	H	V	L	K	N	N	K	Q	F	D	K	E	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	H	W	Q	A	Y	D	F	N	S	G	Y	F
Template Known Secondary structure																	T	T	T	S	S													T	T	T																											T		G	G	G	T	T	T								B	S	S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		F	G	I	F	F	T	D	A	E	S	V	T	C	Y	Q	D	V	M	A	C	D	V	E	R	F	K	R	F	F	H	M	M	L	D	E	G	V	Y	L	A	P	S	A	F	E	A	G	F	M	S	V	A	.	H	S	M	E	D	I	N	N	T	I	D	A	A	R	R	V	F	A	K	L
Query Conservation																																																						.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	I	K	V	H	D	V	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	R	K	H	L	I	D	K	Y	S	I	G	V	I	A	L	N	A	T	D	I	R	I	A	F	S	C	V	E	K	D	D	I	P	H	V	F	D	S	I	A	K	A	I	D	D	L
Template Known Secondary structure							S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.											T								S	S	S						G	G	G	S		G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.															.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions