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Job DescriptionP23893
Confidence99.85%DateThu Jan 5 11:40:26 GMT 2012
Rank191Aligned Residues305
% Identity14%Templatec1ibjC_
PDB info PDB header:lyaseChain: C: PDB Molecule:cystathionine beta-lyase; PDBTitle: crystal structure of cystathionine beta-lyase from arabidopsis2 thaliana
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLG
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Template Sequence  YDYTRSGNPTRDALESLLAKLD. KADRAFCFTSGMAALSAVT. . . HLIKNGEEIVAGDDVYGGSDRLLSQVV. . . . . . . .
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SBTTT

.T
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   125....130.........140...... ...150.........160..... ....170.........180.........190..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  QPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVMT
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Template Sequence  . . . . . . . . PRSGVVVKRVNTTKLDEVAAAIG. . . PQTKLVWLESPTNPRQQISD. . . . IRKISEMAHAQGALVLVDNSIM
Template Known Secondary structure  ........GGGT

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   193......200.........210..... ....220.........230..... ....240.........250.......
 
   242.......250.........260........ .270.........280.........290.........300.........310.........
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Query Sequence  GFRVALAGAQDYYGVVPDLTCLGKIIG. . GGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPG
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Template Sequence  SPVLSRPL. . . ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGS. . GLAPFDCWLCLRGIKTM. . . .
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TTT

GG...GGT
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   258.260..... ....270.........280.........290.........300.........310. ........320........
 
   320.........330.........340.........350... ......360.........370.........380.........390.....
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Query Sequence  VHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGG. . . . MFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAP
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Template Sequence  . . ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSF
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   329330.........340.........350.........360.........370.........380.........390.........400......
 
   396. ..400.........410.........420......
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Query Sequence  SA. . . . . . . . . . . . . . . . . . . . . . . . . . . FEAGFMSVAHSMEDINNTIDAARRVFAKL
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Template Sequence  GSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI. . EDVDDLISDLDIAFKTF
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SSS

TTTTTTTT

SSTTTTSS

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   407..410.........420.........430.........440..... ....450.........460..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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