Job Description Q47013 Confidence 10.64% Date Thu Jan 5 12:36:09 GMT 2012 Rank 23 Aligned Residues 81 % Identity 21% Template d1z21a1 SCOP info Type III secretion system domain Type III secretion system domain YopR Core Resolution 1.50

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		C	Q	L	S	Q	T	Q	L	S	Q	T	F	A	E	K	F	T	V	T	E	E	L	L	Q	S	L	K	K	T	A	L	S	G	D	E	E	S	I	E	L	.	.	L	H	N	I	A	L	G	Y	D	K	F	G	K	E	A	E	D	I	L	Y	H	I	V	R	T	P	T	N	E	T	L	S	I	I	R	L	I	K
Query Conservation																																										.	.
Alig confidence																																										.	.																								.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		Y	Y	A	S	N	P	P	D	H	A	V	L	E	V	L	A	T	P	V	R	E	A	L	L	A	R	F	G	Q	H	Q	G	S	V	V	P	A	I	D	L	P	E	L	R	S	V	L	Q	Q	F	D	S	F	G	K	R	W	E	A	I	L	L	Q	V	L	.	.	.	E	G	I	L	P	Y	L	S	E	L	I	N
Template Known Secondary structure						S	S																						T	T			S																			S		S	S												.	.	.		T
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130
		88	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	C	L	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	L	M	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions