 |
Job Description | Q47013 | Confidence | 7.11% | Date | Thu Jan 5 12:36:09 GMT 2012 |
Rank | 46 | Aligned Residues | 31 |
% Identity | 23% | Template | d1ufwa_ |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
Resolution | UNK |
|
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | H | L | E | D | A | L | N | E | N | I | K | S | D | P | S | W | P | N | E | V | Q | L | F | P | I | N | T | G | G | H | W | I | L | V |
Query Conservation |   |
  |   |
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |
| . | . | . | . |
|
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
E | D | L | R | T | E | L | M | Q | T | L | G | S | Y | G | . |
. |
. |
. |
T | I | V | L | V | R | I | N | Q | G | Q | M | L | V | T | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | . |
|
| S |  |  |  |  |  | T | T |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|