Return to main results Retrieve Phyre Job Id

Job DescriptionQ47013
Confidence46.86%DateThu Jan 5 12:36:09 GMT 2012
Rank12Aligned Residues46
% Identity22%Templatec2wdtA_
PDB info PDB header:hydrolase/protein bindingChain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase l3; PDBTitle: crystal structure of plasmodium falciparum uchl3 in complex2 with the suicide inhibitor ubvme
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   306...310.........320.........330.........340.........350....
Predicted Secondary structure 













Query SS confidence 
















































Query Sequence  QQYLSQSCGAFVCMAAQEVIEQRESNSDSAPYTLLKNHADRFKKYSAEE
Query Conservation 

 









  
 
 
 
   
    


 


 

 
 
 
 

Alig confidence 










...


































Template Conservation 



 




 ...



 
 
      
  

 
  
   
    
  
Template Sequence  KQYIPNSCGTI. . . ALLHLYGNLRNKFELDKDSVLDDFFNKVNEMSAEK
Template Known Secondary structure 


STT
...STTTS


TTSTTTS
Template Predicted Secondary structure 



...














Template SS confidence 
















































   85....90..... ....100.........110.........120.........130
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions