 |
Job Description | Q47013 | Confidence | 5.42% | Date | Thu Jan 5 12:36:09 GMT 2012 |
Rank | 57 | Aligned Residues | 45 |
% Identity | 22% | Template | c2vc6A_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:dihydrodipicolinate synthase; |
PDBTitle: structure of mosa from s. meliloti with pyruvate bound
|
Resolution | 1.95 Å |
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | T | D | E | I | A | C | Y | L | Q | K | I | A | A | N | A | K | N | T | Q | V | N | Y | P | T | G | L | Y | V | . |
P | Y | S | T | R | T | H | L | E | D | A | L | N | E | N | I | K | S | D | P |
Query Conservation |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |   | . |
|   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . |   |
|
|   |
|
|
|   |
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
P | T | Q | E | G | I | Y | Q | H | F | K | A | I | D | A | A | S | T | . |
. |
. |
. |
. |
I | P | I | I | V | Y | N | I | P | G | R | S | A | I | E | I | H | V | E | T | L | A | R | I | F | E | D | C |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | . | . | . | . | . | S |
|  |  |  |  |
|
|  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|