Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9F1
Confidence96.67%DateThu Jan 5 11:10:02 GMT 2012
Rank178Aligned Residues56
% Identity20%Templated2hzta1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.... .....70.........80.........90. ........100.......
Predicted Secondary structure 




.









......






Query SS confidence 












.


























. . . . . .















Query Sequence  VGEARQVDMAARL. GVSQPTVAKMLKRLATMGLIEMIPWRG. . . . . . VFLTAEGEKLAQESRE
Query Conservation   
     


  
. 

  

   
  
   


       ......
 

  
   
  
  
Alig confidence 












.


























......















Template Conservation   
  

 

 
 
 


   

 

  
   


 
      
  
 
 

  
  
 


  
Template Sequence  HGKKRTSELKRLXPNITQKXLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSLEGILDX
Template Known Secondary structure  G

B

TTS
TTS
SSS

TTGGGG
Template Predicted Secondary structure 


















Template SS confidence 






























































   25....30.........40.........50.........60.........70.........80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions