Job Description P0A9F1 Confidence 98.57% Date Thu Jan 5 11:10:02 GMT 2012 Rank 64 Aligned Residues 111 % Identity 13% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.								.	.
Query SS confidence																																																			.	.	.	.	.	.								.	.
Query Sequence		E	L	I	S	D	L	I	R	E	V	G	E	A	R	Q	V	D	M	A	A	R	L	G	V	S	Q	P	T	V	A	K	M	L	K	R	L	A	T	M	G	L	I	E	M	I	P	W	R	G	.	.	.	.	.	.	V	F	L	T	A	E	G	.	.	E	K	L	A	Q	E	S	R	E	R	H	Q	I	V	E	N
Query Conservation																																																			.	.	.	.	.	.								.	.
Alig confidence																																																			.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	G	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	K	D	I	A	K	R	K	H	D	L	I	A	K	T	Y	E
Template Known Secondary structure											S	S												T																T	T	S							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		115	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure							.	.																					.
Query SS confidence							.	.																					.
Query Sequence		F	L	L	V	L	.	.	G	V	S	P	E	I	A	R	R	D	A	E	G	M	E	H	H	V	S	E	.	E	T	L	D	A	F	R	L	F	T	Q	K	H	G
Query Conservation							.	.																					.
Alig confidence							.	.																					.
Template Conservation
Template Sequence		D	L	K	K	L	E	E	K	C	N	E	E	E	K	E	F	I	K	Q	K	I	K	G	I	E	R	X	K	K	I	S	E	K	I	L	E	A	L	N	D	L	D
Template Known Secondary structure										S		T	T	S												T												G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions