 |
Job Description | P0A9F1 | Confidence | 93.39% | Date | Thu Jan 5 11:10:02 GMT 2012 |
Rank | 268 | Aligned Residues | 62 |
% Identity | 19% | Template | c3iz6S_ |
PDB info |
PDB header:ribosome | Chain: S: PDB Molecule:40s ribosomal protein s19 (s19e); |
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
|
Resolution | 5.50 Å |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | S | D | L | I | R | E | V | G | E | A | R | Q | V | D | M | A | A | R | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | S | Q | P | T | V | A | K | M | L | K | R | L | A | T | M | G | L | I | E | M | I | P | W | R | G | V | F | L | T | A | E | G | E | K | L | A | Q | E | S |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|
|
|   |   |   |
|
|
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|
|
|   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |
|
Template Sequence |   |
S | I | A | R | K | I | Y | L | R | Q | G | I | G | V | G | G | F | Q | K | I | Y | G | G | R | Q | R | N | G | S | R | P | P | H | F | C | K | S | S | G | A | I | S | R | N | I | L | Q | Q | L | Q | K | M | G | I | I | D | V | D | P | K | G | G | R | L | I | T | S | Q | G | R | R | D | L | D | Q | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S | B |
|  |  |  |  |  | S | S | S |
|
|
|
|
|
|
| S | S |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  | T | T | T |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|