 |
Job Description | P0A9F1 | Confidence | 88.80% | Date | Thu Jan 5 11:10:02 GMT 2012 |
Rank | 317 | Aligned Residues | 57 |
% Identity | 23% | Template | c2xv4S_ |
PDB info |
PDB header:transcription | Chain: S: PDB Molecule:dna-directed rna polymerase iii subunit rpc3; |
PDBTitle: structure of human rpc62 (partial)
|
Resolution | 2.95 Å |
|
 |
  |   |
35 | . | . | . | . | 40 | . | . | |
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | L | I | D | D | Y | V | . |
. |
. |
. |
E | L | I | S | D | L | I | R | E | V | G | E | A | R | Q | V | D | M | A | A | R | L | G | V | S | Q | P | T | V | A | K | M | L | K | R | L | A | T | M | G | L | I | E | M | I | P | W | R | G |
Query Conservation |   |
  |   |   |   |
|
|
|
| . | . | . | . |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |
Template Sequence |   |
S | L | L | L | Q | E | H | F | G | E | I | V | E | K | I | G | V | H | L | I | R | T | G | S | Q | P | L | R | V | I | A | H | D | T | G | T | S | L | D | Q | V | K | K | A | L | C | V | L | V | Q | H | N | L | V | S | Y | Q | V | H | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | S |
| S |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|