Job Description P0A9F1 Confidence 85.95% Date Thu Jan 5 11:10:02 GMT 2012 Rank 335 Aligned Residues 107 % Identity 13% Template c2plyB_ PDB info PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. Resolution 2.60 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		R	E	L	I	D	D	Y	V	E	L	I	S	D	L	I	R	E	V	G	.	.	E	A	R	Q	V	D	M	A	A	R	L	G	V	S	Q	P	T	V	A	K	M	L	K	R	L	A	T	M	G	L	I	E	M	I	P	W	R	G	V	F	L	T	A	E	G	E	K	L	A	Q	E	S	R	E	R	H	Q	I	V
Query Conservation																					.	.
Alig confidence																					.	.																																												.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		S	E	T	Q	K	K	L	L	K	D	L	E	D	K	Y	R	V	S	R	W	Q	P	P	W	V	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	N	D	E	F	Y	W	H	R	Q	.	.	.	.	.	.	.	A	L	G	E	A	R	E	V	I
Template Known Secondary structure																				T	T	S											T	T																	T	S				S	S	S	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.								.	.	.	.	580	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	F	L	L	V	L	G	V	S	P	E	I	A	R	R	D	A	E	G	M	E	H	H	V	S	E	E	T	L	D	A	F	R	L	F	T	Q	K	H	G
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		K	N	L	A	S	T	G	P	F	G	L	A	E	A	R	D	A	L	.	.	.	.	.	G	S	S	R	K	Y	V	L	P	L	L	E	Y	L	D	Q	V	K
Template Known Secondary structure						T	T	S		B										.	.	.	.	.	T																T	T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.						.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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