Job Description P0A9F1 Confidence 98.61% Date Thu Jan 5 11:10:02 GMT 2012 Rank 59 Aligned Residues 144 % Identity 13% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	K	K	V	T	Q	L	V	N	V	E	E	H	V	E	G	F	R	Q	V	R	E	A	H	R	R	E	L	I	D	D	Y	V	E	L	I	S	D	L	I	R	E	V	G	E	A	R	Q	V	D	M	A	A	R	L	G	V	S	Q	P	T	V	A	K	M	L	K	R	L	A	T	M	G	L	I	E	M	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	D	K	I	R	D	F	I	I	I	E	A	Y	M	F	R	F	K	K	K	V	K	P	E	V	D	M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	S	Y	I	S	K	V	R
Template Known Secondary structure				S																				T	T	T		S	S													S		S		S											S	S	S		G	G	G	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		89	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure				.	.	.	.	.	.																			.
Query SS confidence				.	.	.	.	.	.																			.
Query Sequence		W	R	.	.	.	.	.	.	G	V	F	L	T	A	E	G	E	K	L	A	Q	E	S	R	E	R	.	H	Q	I	V	E	N	F	L	L	V	L	G	V	S	P	E	I	A	R	R	D	A	E	G	M	E	H	H	V	S	E	E	T	L	D	A	F	R	L	F	T	Q	K	H	G
Query Conservation				.	.	.	.	.	.																			.
Alig confidence				.	.	.	.	.	.																			.																										.
Template Conservation																																																						.
Template Sequence		S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V	T	L	F	D	Q	I	I	K	Q	F	N	L	A	D	Q	S	E	S	Q	M	I	P	K	D	S	K	E	F	.	L	N	L	M	M	Y	T	M	Y	F	K	N	I	I	K	K	H	L	T
Template Known Secondary structure			S	S	S	T	T	S																															T	T			S	S		S			S					.																			S
Template Predicted Secondary structure																																																						.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions