 |
Job Description | P0A9F1 | Confidence | 89.07% | Date | Thu Jan 5 11:10:02 GMT 2012 |
Rank | 314 | Aligned Residues | 47 |
% Identity | 19% | Template | c1dpuA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; |
PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
|
Resolution | UNK |
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
. | . | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | D | Y | V | E | L | I | S | D | L | I | R | E | V | G | E | . |
. |
. |
A | R | Q | V | D | M | A | A | R | L | . |
G | V | S | Q | P | T | V | A | K | M | L | K | R | L | A | T | M | G | L | I |
Query Conservation |   |
  |
|
|
|
|   |   |
|   |   |
|   |   |   |   |
|   | . | . | . |   |   |   |   |
|
|
|   |   |
| . |   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |
|
Template Sequence |   |
L | T | V | A | Q | N | Q | V | L | N | L | I | K | A | C | P | R | P | E | G | L | N | F | Q | D | L | K | N | Q | L | K | H | M | S | V | S | S | I | K | Q | A | V | D | F | L | S | N | E | G | H | I |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|