Job Description P46139 Confidence 94.74% Date Thu Jan 5 12:04:08 GMT 2012 Rank 24 Aligned Residues 122 % Identity 13% Template c3pjvD_ PDB info PDB header:lyase Chain: D: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd periplasmic domain Resolution 1.77 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		S	V	T	S	V	L	T	L	K	Q	Y	A	Q	K	N	L	A	L	T	A	A	T	M	T	Y	S	L	E	A	A	V	V	F	A	D	G	P	A	A	T	E	T	L	A	A	L	G	Q	Q	G	Q	F	S	T	A	E	V	R	D	K	Q	.	Q	N	I	L	A	S	W	H	Y	T	R	K	D	P	G	D	T	F
Query Conservation																																																															.
Alig confidence																																	.	.																													.
Template Conservation																																	.	.
Template Sequence		L	E	S	S	R	T	Q	Y	V	N	Q	L	R	S	H	A	Q	D	A	A	T	A	L	A	L	S	L	T	P	N	I	.	.	D	D	P	A	X	V	E	L	L	V	S	S	I	F	D	S	G	Y	Y	S	S	I	R	V	V	D	L	K	T	D	Q	T	I	V	E	R	N	G	I	P	A	V	T	N	V	P	D
Template Known Secondary structure																													G	G	G	T	.	.	T														T	T	S			S							T	T	T												S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	F	I	S	H	W	L	F	P	A	P	I	I	Q	P	I	R	H	N	G	E	T	I	G	E	V	R	L	T	A	R	D	S	S	I	S	H	F	I	W	F	S	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	F	V	K	L	I	G	L	E	P	A	G	G	D	A	L	V	S	R	G	W	E	Q	A	A	R	V	E	V	V	S	H	P	X	F	A	L	A	K	L	W	Q	S	A	L
Template Known Secondary structure																					T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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