 |
Job Description | P46139 | Confidence | 26.80% | Date | Thu Jan 5 12:04:08 GMT 2012 |
Rank | 52 | Aligned Residues | 83 |
% Identity | 17% | Template | c3l7xA_ |
PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:putative hit-like protein involved in cell-cycle |
PDBTitle: the crystal structure of smu.412c from streptococcus mutans ua159
|
Resolution | 1.70 Å |
|
 |
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | |
|
|
. | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
N | S | D | A | R | K | T | S | A | L | L | F | L | . |
. |
. |
D | G | D | N | F | K | Y | I | N | D | T | W | G | H | A | T | G | D | R | V | L | I | E | I | A | K | R | L | A | E | F | G | G | L | R | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | A | Y | R | L | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
| . | . | . |
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |
Template Sequence |   |
D | I | S | Q | A | T | K | G | H | T | L | V | I | P | K | E | H | V | R | N | A | L | E | M | T | Q | T | Q | A | A | N | L | F | A | . |
R | I | P | K | I | A | R | A | L | Q | K | A | T | K | A | D | G | L | N | I | I | N | N | N | E | E | T | A | G | Q | T | V | F | H | A | H | V | H | L | V | P | R | F | A | S |
Template Known Secondary structure |   |
| T | T |
| S | S | T | T |
|  |  |  |  |  | S | S |
|
| S |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  | . | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |
|
| S | G | G | G | T |
|
| S |
| S |
|
|  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
329 | 330 | . | . | . | . | . | . | . | . | . | |
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | F | A | M | V | L | Y | D | V | Q | . |
S | E | S | E | V | Q | Q | I | C | S | A | L | T | Q | I | F | N |
Query Conservation |   |
|
|
|   |
|
|
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
Template Sequence |   |
D | E | F | D | I | R | F | V | Q | H | E | P | D | F | T | R | L | G | Q | L | A | E | D | I | Q | K | E | I | E |
Template Known Secondary structure |   |
| S |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|