Job Description P46139 Confidence 13.31% Date Thu Jan 5 12:04:08 GMT 2012 Rank 66 Aligned Residues 50 % Identity 20% Template c3iyuY_ PDB info PDB header:virus Chain: Y: PDB Molecule:outer capsid protein vp4; PDBTitle: atomic model of an infectious rotavirus particle Resolution 3.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		A	R	K	T	S	A	L	L	F	L	D	G	D	N	F	K	Y	I	N	D	T	W	G	H	.	.	A	T	G	D	R	V	L	I	E	I	A	K	R	L	A	E	F	G	G	L	R	H	K	A	Y	R
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		T	D	S	P	V	I	S	A	I	I	D	F	K	T	L	K	N	L	N	D	N	Y	G	I	S	R	Q	Q	A	F	N	L	L	R	S	D	P	R	V	L	R	E	F	I	N	Q	D	N	P	I	I	R
Template Known Secondary structure			T	S			B			S	S											T	T													T											S	S		S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		713	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions