Job Description P46139 Confidence 7.65% Date Thu Jan 5 12:04:08 GMT 2012 Rank 90 Aligned Residues 63 % Identity 24% Template c1t94B_ PDB info PDB header:replication Chain: B: PDB Molecule:polymerase (dna directed) kappa; PDBTitle: crystal structure of the catalytic core of human dna2 polymerase kappa Resolution 2.40 Å

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		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.																						.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	V	L	I	E	I	A	K	R	L	A	E	F	G	G	L	R	H	K	A	Y	R	L	G	G	D	E	F	A	M	V	L	Y	D	V	Q	S	E	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	Q	I	C	S	A	L	T	Q	I	F	N	L	P	F	D	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																		.	.	.																																																													.
Template Sequence		R	A	V	S	K	E	V	K	E	I	L	A	D	Y	D	P	.	.	.	N	F	M	A	M	S	L	D	E	A	Y	L	N	I	T	K	H	L	E	E	R	Q	N	W	P	E	D	K	R	R	Y	F	I	K	Q	N	S	V	V	F	G	T	S	A	Q	E	V	V	K	E	I	R	F	R	I	E	Q	K	T	T	.
Template Known Secondary structure													T	T	T		T	.	.	.	T					S	S	S														T	T			G	G	G	G													S	S																S	S	.
Template Predicted Secondary structure																		.	.	.																																																													.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	G	H	Q	T	T	M	T	L	S	I	G	Y	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	T	A	S	A	G	I	A
Template Known Secondary structure		.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									307	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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