Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 24 Aligned Residues 135 % Identity 24% Template c7mdhA_ PDB info PDB header:chloroplastic malate dehydrogenase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: structural basis for light acitvation of a chloroplast enzyme. the2 structure of sorghum nadp-malate dehydrogenase in its oxidized form Resolution 2.40 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.
Predicted Secondary structure					.																																						.																													.
Query SS confidence					.																																						.																													.
Query Sequence		K	T	C	.	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	.	G	G	H	S	G	V	T	I	L
Query Conservation					.																																						.																													.
Alig confidence					.																					.	.	.	.														.																													.				.
Template Conservation																										.	.	.	.																																															.
Template Sequence		A	V	A	S	K	N	V	K	V	L	V	V	G	N	P	C	N	T	N	A	L	I	C	L	.	.	.	.	K	N	A	P	D	I	P	A	K	N	F	H	A	L	T	R	L	D	E	N	R	A	K	C	Q	L	A	L	K	A	G	V	F	Y	D	K	V	S	N	V	T	I	W	G	N	H	.	S	T	T	Q	V
Template Known Secondary structure				S		T	T							S	S	S										.	.	.	.		T		T	T	S		G	G	G																				T	T	S		G	G	G								B		S	.	S	T	T
Template Predicted Secondary structure																										.	.	.	.																																															.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																																																	.	.
Query SS confidence																		.	.	.	.	.	.	.	.																																																	.	.
Query Sequence		P	L	L	S	Q	V	P	G	V	S	F	T	E	Q	E	V	.	.	.	.	.	.	.	.	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	.	.	V	V	E	C
Query Conservation																		.	.	.	.	.	.	.	.																																																	.	.
Alig confidence																		.	.	.	.	.	.	.	.																			.	.																				.	.	.							.	.
Template Conservation																																												.	.																				.	.	.
Template Sequence		P	D	F	L	N	A	K	I	D	G	R	P	V	K	E	V	I	K	R	T	K	W	L	E	E	E	F	T	I	T	V	Q	K	R	G	G	A	L	I	Q	K	W	.	.	G	R	S	S	A	A	S	T	A	V	S	I	A	D	A	I	K	S	L	.	.	.	V	T	P	T	P	E	G	D	W	F	S	T
Template Known Secondary structure					S	S				T	T			G	G	G	T																	T									T	.	.	S	S																		.	.	.		S				T	T
Template Predicted Secondary structure																																												.	.																				.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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